RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1137393" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1137393 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28227748 28227748 PRJNA1137393_P_NODE_39306_length_169_cov_1.300000_g38790_i0 PRJNA1137393 39306 169 1.3 2.197 Viruses 10239 Viruses Viruses 102 1.6499999999999995e-23   NR QXV86355.1 1955170 g38790 i0 73.2 1.98816568047337 56 15 99.4 0 169 2 246 301 QXV86355.1 RNA-dependent RNA polymerase [Partitiviridae sp.] diamond 336 102 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Partitiviridae sp.
28807020 28807020 PRJNA1137393_P_NODE_65008_length_163_cov_1.561404_g64492_i0 PRJNA1137393 65008 163 1.561404 2.54508852 Coprinus comatus partitivirus 1 3115824 Viruses Viruses 67.8 1.85e-11   NR WUR08103.1 3115824 g64492 i0 52.5 1.12269938650307 61 21 97.5 1 162 4 432 492 WUR08103.1 RNA-dependent RNA polymerase [Coprinus comatus partitivirus 1] diamond 183 67.8 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Coprinus comatus partitivirus 1
30986811 30986811 PRJNA1137393_P_NODE_6834_length_325_cov_1.974638_g6318_i0 PRJNA1137393 6834 325 1.974638 6.4175735 Coprinus comatus partitivirus 3115581 Viruses Viruses 187 2.8499999999999996e-54   NR WTM26314.1 3115581 g6318 i0 78.7 0.996923076923077 108 23 99.7 0 324 1 130 237 WTM26314.1 RNA-dependent RNA polymerase [Coprinus comatus partitivirus] diamond 324 187 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Coprinus comatus partitivirus
32252047 32252047 PRJNA1137393_P_NODE_42158_length_169_cov_0.866667_g41642_i0 PRJNA1137393 42158 169 0.866667 1.46466723 Coprinus comatus partitivirus 1 3115824 Viruses Viruses 64.7 2.35e-10   NR WUR08103.1 3115824 g41642 i0 56.6 0.940828402366864 53 21 94.1 1 161 3 305 355 WUR08103.1 RNA-dependent RNA polymerase [Coprinus comatus partitivirus 1] diamond 159 64.7 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Coprinus comatus partitivirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;