RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1137393" and tax_phylum = "Kitrinoviricota"

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tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1137393 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30627931 30627931 PRJNA1137393_P_NODE_10013_length_262_cov_0.887324_g9497_i0 PRJNA1137393 10013 262 0.887324 2.32478888 Ilarvirus 12316 Viruses Viruses 84.7 8.17e-17   NR QOE55592.1 2741660 g9497 i0 50 2.91984732824427 84 42 96.2 0 2 253 355 438 QOE55592.1 replicase [Macrophomina phaseolina ilar-like virus] diamond 765 84.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Ilarvirus Macrophomina phaseolina ilar-like virus
32714595 32714595 PRJNA1137393_P_NODE_6680_length_330_cov_1.110320_g6164_i0 PRJNA1137393 6680 330 1.11032 3.664056 Martellivirales 2732544 Viruses Viruses 84.3 2.74e-16   NR QZW25478.1 2872749 g6164 i0 39.3 1.96363636363636 107 65 97.3 0 330 10 157 263 QZW25478.1 replicase [Grapevine toga-like virus] diamond 648 84.3 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Togaviridae   Grapevine toga-like virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;