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contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJNA1137393" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 28 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1137393 · 28 ✖

analysis 1

  • diamond · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27070350 27070350 PRJNA1137393_P_NODE_73502_length_162_cov_0.920354_g72986_i0 PRJNA1137393 73502 162 0.920354 1.49097348 Engystomops pustulosus 76066 Chordata Chordata 45.4 0.00138   NR KAG8571490.1 76066 g72986 i0 60.9 3.42592592592593 46 18 85.2 0 6 143 1030 1075 KAG8571490.1 hypothetical protein GDO81_011667 [Engystomops pustulosus] diamond 555 45.8 0.991266375545852 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Leptodactylidae Engystomops Engystomops pustulosus
27165041 27165041 PRJNA1137393_P_NODE_49542_length_167_cov_0.881356_g49026_i0 PRJNA1137393 49542 167 0.881356 1.47186452 Staurois parvus 386267 Chordata Chordata 50.1 5.09e-6   NR CAI9547784.1 386267 g49026 i0 43.6 1.67065868263473 55 31 98.8 0 2 166 21 75 CAI9547784.1 unnamed protein product, partial [Staurois parvus] diamond 279 50.1 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
27797103 27797103 PRJNA1137393_P_NODE_58044_length_165_cov_0.896552_g57528_i0 PRJNA1137393 58044 165 0.896552 1.4793108 Equus przewalskii 9798 Chordata Chordata 50.8 1.78e-5   NR XP_070443790.1 9798 g57528 i0 71.4 1.58181818181818 28 8 50.9 0 148 65 965 992 XP_070443790.1 uncharacterized protein [Equus przewalskii] diamond 261 50.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Perissodactyla Equidae Equus Equus przewalskii
27859919 27859919 PRJNA1137393_P_NODE_17545_length_211_cov_1.080247_g17029_i0 PRJNA1137393 17545 211 1.080247 2.27932117 Engystomops pustulosus 76066 Chordata Chordata 57 2.35e-7   NR KAG8571490.1 76066 g17029 i0 51.5 4.69194312796209 66 32 93.8 0 208 11 1022 1087 KAG8571490.1 hypothetical protein GDO81_011667 [Engystomops pustulosus] diamond 990 57 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Leptodactylidae Engystomops Engystomops pustulosus
28007202 28007202 PRJNA1137393_P_NODE_37865_length_171_cov_0.827869_g37349_i0 PRJNA1137393 37865 171 0.827869 1.41565599 Anura 8342 Chordata Chordata 42 0.0264   NR XP_066453998.1 57060 g37349 i0 54.3 2.47368421052632 35 16 61.4 0 66 170 116 150 XP_066453998.1 uncharacterized protein [Eleutherodactylus coqui] diamond 423 42 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Eleutherodactylidae Eleutherodactylus Eleutherodactylus coqui
28049514 28049514 PRJNA1137393_P_NODE_48065_length_167_cov_0.881356_g47549_i0 PRJNA1137393 48065 167 0.881356 1.47186452 Pleurodeles waltl 8319 Chordata Chordata 64.3 3.24e-10   NR KAJ1209028.1 8319 g47549 i0 48.1 1.94011976047904 54 28 97 0 3 164 497 550 KAJ1209028.1 hypothetical protein NDU88_004407 [Pleurodeles waltl] diamond 324 64.3 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Caudata Salamandridae Pleurodeles Pleurodeles waltl
28049518 28049518 PRJNA1137393_P_NODE_61845_length_164_cov_0.904348_g61329_i0 PRJNA1137393 61845 164 0.904348 1.48313072 Engystomops pustulosus 76066 Chordata Chordata 52 6.75e-7   NR KAG8573553.1 76066 g61329 i0 61.5 12.6585365853659 52 20 95.1 0 163 8 8 59 KAG8573553.1 hypothetical protein GDO81_012454 [Engystomops pustulosus] diamond 2076 52.4 0.99236641221374 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Leptodactylidae Engystomops Engystomops pustulosus
28207210 28207210 PRJNA1137393_P_NODE_74726_length_155_cov_2.726415_g74210_i0 PRJNA1137393 74726 155 2.726415 4.22594325 Ranitomeya imitator 111125 Chordata Chordata 44.3 0.00313   NR CAJ0956274.1 111125 g74210 i0 52.9 1.35483870967742 34 16 65.8 0 48 149 1 34 CAJ0956274.1 unnamed protein product [Ranitomeya imitator] diamond 210 44.7 0.991051454138702 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dendrobatidae Ranitomeya Ranitomeya imitator
28322672 28322672 PRJNA1137393_P_NODE_42086_length_169_cov_0.866667_g41570_i0 PRJNA1137393 42086 169 0.866667 1.46466723 Amphibia 8292 Chordata Chordata 56.6 1.76e-7   NR XP_069461787.1 8296 g41570 i0 51.9 1.95266272189349 54 25 94.1 1 1 159 530 583 XP_069461787.1 uncharacterized protein [Ambystoma mexicanum] diamond 330 57 0.992982456140351 Eukaryota Opisthokonta Metazoa Chordata Amphibia Caudata Ambystomatidae Ambystoma Ambystoma mexicanum
29028617 29028617 PRJNA1137393_P_NODE_58308_length_165_cov_0.896552_g57792_i0 PRJNA1137393 58308 165 0.896552 1.4793108 Orcinus orca 9733 Chordata Chordata 50.8 1.78e-5   NR XP_049552061.1 9733 g57792 i0 65.3 2.67272727272727 49 15 85.5 2 141 1 237 285 XP_049552061.1 COMM domain-containing protein 1 isoform X1 [Orcinus orca] diamond 441 50.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
29091582 29091582 PRJNA1137393_P_NODE_33188_length_177_cov_1.171875_g32672_i0 PRJNA1137393 33188 177 1.171875 2.07421875 Eretmochelys imbricata 27787 Chordata Chordata 43.1 0.0119   NR CAM5095396.1 27787 g32672 i0 37.3 2.25423728813559 67 26 86.4 2 7 159 3665 3731 CAM5095396.1 unnamed protein product [Eretmochelys imbricata] diamond 399 43.1 1 Eukaryota Opisthokonta Metazoa Chordata   Testudines Cheloniidae Eretmochelys Eretmochelys imbricata
29123327 29123327 PRJNA1137393_P_NODE_22569_length_195_cov_0.917808_g22053_i0 PRJNA1137393 22569 195 0.917808 1.7897256 Heterodontus francisci 7792 Chordata Chordata 51.6 1.09e-5   NR XP_067875135.1 7792 g22053 i0 54.7 0.815384615384615 53 22 81.5 1 25 183 8 58 XP_067875135.1 ras homolog family member Ub isoform X2 [Heterodontus francisci] diamond 159 51.6 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Heterodontiformes Heterodontidae Heterodontus Heterodontus francisci
29123328 29123328 PRJNA1137393_P_NODE_26509_length_187_cov_1.318841_g25993_i0 PRJNA1137393 26509 187 1.318841 2.46623267 Nyctereutes procyonoides 34880 Chordata Chordata 40.8 0.0412   NR CAD7673045.1 34880 g25993 i0 74.2 0.497326203208556 31 8 49.7 0 90 182 99 129 CAD7673045.1 unnamed protein product [Nyctereutes procyonoides] diamond 93 40.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Nyctereutes Nyctereutes procyonoides
29123330 29123330 PRJNA1137393_P_NODE_34989_length_174_cov_1.616000_g34473_i0 PRJNA1137393 34989 174 1.616 2.81184 Peromyscus californicus insignis 564181 Chordata Chordata 48.1 1.79e-4   NR XP_052608684.1 564181 g34473 i0 45.8 0.827586206896552 48 26 82.8 0 152 9 173 220 XP_052608684.1 zinc finger protein 709-like [Peromyscus californicus insignis] diamond 144 48.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Cricetidae Peromyscus Peromyscus californicus
29123340 29123340 PRJNA1137393_P_NODE_72469_length_162_cov_0.920354_g71953_i0 PRJNA1137393 72469 162 0.920354 1.49097348 Styela clava 7725 Chordata Chordata 57.4 8.22e-8   NR XP_039264563.1 7725 g71953 i0 63 3.55555555555556 46 16 85.2 1 154 17 437 481 XP_039264563.1 uncharacterized protein LOC120340385 [Styela clava] diamond 576 57.4 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Stolidobranchia Styelidae Styela Styela clava
29186393 29186393 PRJNA1137393_P_NODE_41329_length_169_cov_0.866667_g40813_i0 PRJNA1137393 41329 169 0.866667 1.46466723 Pleurodeles waltl 8319 Chordata Chordata 80.1 8.94e-16   NR KAJ1096084.1 8319 g40813 i0 70.9 2.92899408284024 55 16 97.6 0 3 167 579 633 KAJ1096084.1 hypothetical protein NDU88_001230 [Pleurodeles waltl] diamond 495 80.1 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Caudata Salamandridae Pleurodeles Pleurodeles waltl
29722652 29722652 PRJNA1137393_P_NODE_51130_length_167_cov_0.881356_g50614_i0 PRJNA1137393 51130 167 0.881356 1.47186452 Pleurodeles waltl 8319 Chordata Chordata 89.7 3.7e-19   NR KAJ1082712.1 8319 g50614 i0 70.9 7.8502994011976 55 16 98.8 0 167 3 1404 1458 KAJ1082712.1 hypothetical protein NDU88_002877 [Pleurodeles waltl] diamond 1311 89.7 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Caudata Salamandridae Pleurodeles Pleurodeles waltl
29849334 29849334 PRJNA1137393_P_NODE_65451_length_163_cov_1.175439_g64935_i0 PRJNA1137393 65451 163 1.175439 1.91596557 Staurois parvus 386267 Chordata Chordata 45.8 2.12e-4   NR CAI9547784.1 386267 g64935 i0 40.4 0.957055214723926 52 31 95.7 0 158 3 34 85 CAI9547784.1 unnamed protein product, partial [Staurois parvus] diamond 156 45.8 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
30323714 30323714 PRJNA1137393_P_NODE_65812_length_163_cov_0.912281_g65296_i0 PRJNA1137393 65812 163 0.912281 1.48701803 Branchiostoma belcheri 7741 Chordata Chordata 43.5 0.00683   NR KAI8494107.1 7741 g65296 i0 37.5 4.41717791411043 48 30 88.3 0 145 2 214 261 KAI8494107.1 hypothetical protein Bbelb_284540 [Branchiostoma belcheri] diamond 720 43.5 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri
30386740 30386740 PRJNA1137393_P_NODE_67093_length_163_cov_0.912281_g66577_i0 PRJNA1137393 67093 163 0.912281 1.48701803 Acinonyx jubatus 32536 Chordata Chordata 46.6 5.58e-4   NR XP_053055818.1 32536 g66577 i0 55.6 0.828220858895706 45 16 82.8 1 135 1 6 46 XP_053055818.1 polypeptide N-acetylgalactosaminyltransferase 10 isoform X1 [Acinonyx jubatus] diamond 135 46.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Acinonyx Acinonyx jubatus
30797008 30797008 PRJNA1137393_P_NODE_58094_length_165_cov_0.896552_g57578_i0 PRJNA1137393 58094 165 0.896552 1.4793108 Rousettus aegyptiacus 9407 Chordata Chordata 42 0.01   NR KAF6495744.1 9407 g57578 i0 55.6 0.818181818181818 45 18 78.2 1 30 158 53 97 KAF6495744.1 hypothetical protein HJG63_010133 [Rousettus aegyptiacus] diamond 135 42 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Rousettus Rousettus aegyptiacus
30860297 30860297 PRJNA1137393_P_NODE_36574_length_172_cov_1.560976_g36058_i0 PRJNA1137393 36574 172 1.560976 2.68487872 Pleurodeles waltl 8319 Chordata Chordata 72.4 5.03e-13   NR KAJ1196035.1 8319 g36058 i0 64.4 1.7093023255814 45 16 78.5 0 37 171 608 652 KAJ1196035.1 hypothetical protein NDU88_005295 [Pleurodeles waltl] diamond 294 72.4 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Caudata Salamandridae Pleurodeles Pleurodeles waltl
31207351 31207351 PRJNA1137393_P_NODE_28675_length_184_cov_0.711111_g28159_i0 PRJNA1137393 28675 184 0.711111 1.30844424 Ranitomeya imitator 111125 Chordata Chordata 53.1 3.65e-6   NR CAJ0920470.1 111125 g28159 i0 63.2 1.23913043478261 38 14 62 0 2 115 709 746 CAJ0920470.1 unnamed protein product [Ranitomeya imitator] diamond 228 53.1 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dendrobatidae Ranitomeya Ranitomeya imitator
31618985 31618985 PRJNA1137393_P_NODE_72876_length_162_cov_0.920354_g72360_i0 PRJNA1137393 72876 162 0.920354 1.49097348 Vulpes vulpes 9627 Chordata Chordata 42 0.0232   NR XP_025856236.1 9627 g72360 i0 69.6 0.425925925925926 23 7 42.6 0 125 57 137 159 XP_025856236.1 LOW QUALITY PROTEIN: uncharacterized protein LOC112921192 [Vulpes vulpes] diamond 69 42 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Canidae Vulpes Vulpes vulpes
32462373 32462373 PRJNA1137393_P_NODE_74019_length_160_cov_2.315315_g73503_i0 PRJNA1137393 74019 160 2.315315 3.704504 Chondrichthyes 7777 Chordata Chordata 43.9 0.00424   NR XP_039359890.1 260615 g73503 i0 56.8 4.48125 37 15 69.4 1 49 159 141 176 XP_039359890.1 mth938 domain-containing protein isoform X2 [Mauremys reevesii] diamond 717 43.9 1 Eukaryota Opisthokonta Metazoa Chordata   Testudines Geoemydidae Mauremys Mauremys reevesii
32662380 32662380 PRJNA1137393_P_NODE_11940_length_242_cov_1.170984_g11424_i0 PRJNA1137393 11940 242 1.170984 2.83378128 Engystomops pustulosus 76066 Chordata Chordata 51.6 2.8e-5   NR KAG8571490.1 76066 g11424 i0 62.2 9.17355371900826 37 14 45.9 0 114 4 982 1018 KAG8571490.1 hypothetical protein GDO81_011667 [Engystomops pustulosus] diamond 2220 51.6 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Leptodactylidae Engystomops Engystomops pustulosus
32662383 32662383 PRJNA1137393_P_NODE_47620_length_167_cov_1.398305_g47104_i0 PRJNA1137393 47620 167 1.398305 2.33516935 Orycteropus afer afer 1230840 Chordata Chordata 41.2 0.0469   NR XP_007954483.1 1230840 g47104 i0 45.1 0.916167664670659 51 22 84.4 2 27 167 7 55 XP_007954483.1 ribonuclease P protein subunit p30 [Orycteropus afer afer] diamond 153 41.2 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Tubulidentata Orycteropodidae Orycteropus Orycteropus afer
32662396 32662396 PRJNA1137393_P_NODE_75200_length_152_cov_2.563107_g74684_i0 PRJNA1137393 75200 152 2.563107 3.89592264 Myotis brandtii 109478 Chordata Chordata 49.3 5.2e-5   NR EPQ05981.1 109478 g74684 i0 96.2 0.513157894736842 26 1 51.3 0 81 4 53 78 EPQ05981.1 Signal transduction protein CBL-C [Myotis brandtii] diamond 78 49.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Vespertilionidae Myotis Myotis brandtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;