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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA1137393" and tax_kingdom = "Thermoproteati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 5 ✖

bioproject 1

  • PRJNA1137393 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5388049 5388049 PRJNA1137393_P_NODE_70665_length_162_cov_0.920354_g70149_i0 PRJNA1137393 70665 162 0.920354 1.49097348 Nitrosarchaeum sp. 2026886 Archaea Archaea 94.7 1.78e-21   NR MDW7641251.1 2026886 g70149 i0 79.6 1 54 11 100 0 1 162 253 306 MDW7641251.1 GDP-mannose 4,6-dehydratase [Nitrosarchaeum sp.] diamond 162 94.7 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
26721766 26721766 PRJNA1137393_P_NODE_27821_length_185_cov_1.250000_g27305_i0 PRJNA1137393 27821 185 1.25 2.3125 Pyrobaculum sp. 2004705 Archaea Archaea 95.9 3.5700000000000003e-22   NR MCC6067069.1 2004705 g27305 i0 75 1.96216216216216 60 15 97.3 0 2 181 41 100 MCC6067069.1 ABC transporter substrate-binding protein [Pyrobaculum sp.] diamond 363 95.9 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum sp.
31461088 31461088 PRJNA1137393_P_NODE_24196_length_191_cov_1.401408_g23680_i0 PRJNA1137393 24196 191 1.401408 2.67668928 Nitrosopumilus sp. 2024843 Archaea Archaea 65.5 1.78e-12   NR MBA3977546.1 2024843 g23680 i0 77.4 0.486910994764398 31 7 48.7 0 1 93 21 51 MBA3977546.1 hypothetical protein [Nitrosopumilus sp.] diamond 93 65.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
31556010 31556010 PRJNA1137393_P_NODE_70816_length_162_cov_0.920354_g70300_i0 PRJNA1137393 70816 162 0.920354 1.49097348 Nitrososphaerota archaeon 2026795 Archaea Archaea 76.3 1.86e-14   NR MDE0526730.1 2026795 g70300 i0 67.9 7.74074074074074 53 17 98.1 0 3 161 950 1002 MDE0526730.1 DEAD/DEAH box helicase family protein [Nitrososphaerota archaeon] diamond 1254 76.3 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
31966820 31966820 PRJNA1137393_P_NODE_27778_length_185_cov_1.316176_g27262_i0 PRJNA1137393 27778 185 1.316176 2.4349256 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 72 8.63e-15   NR MFL6413003.1 2169593 g27262 i0 85.7 0.681081081081081 42 6 68.1 0 59 184 1 42 MFL6413003.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 126 72 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;