RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1137393" and tax_kingdom = "Shotokuvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Shotokuvirae · 3 ✖

bioproject 1

  • PRJNA1137393 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28302087 28302087 PRJNA1137393_P_NODE_74926_length_154_cov_2.257143_g74410_i0 PRJNA1137393 74926 154 2.257143 3.47600022 Ambidensovirus sp. 2050976 Viruses Viruses 57 1.03e-7   NR AWV66983.1 2050976 g74410 i0 54.3 0.896103896103896 46 21 89.6 0 139 2 271 316 AWV66983.1 Non-structural ORF [Ambidensovirus sp.] diamond 138 57 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Protoambidensovirus Protoambidensovirus incertum3
29912615 29912615 PRJNA1137393_P_NODE_7371_length_311_cov_1.068702_g6855_i0 PRJNA1137393 7371 311 1.068702 3.32366322 Parvovirus panthera4442 3117168 Viruses Viruses 50.8 1.15e-4   NR DBA46932.1 3117168 g6855 i0 46.9 0.472668810289389 49 25 46.3 1 144 1 103 151 DBA46932.1 MAG TPA_asm: VP [Parvovirus panthera4442] diamond 147 50.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus panthera4442
31334214 31334214 PRJNA1137393_P_NODE_60576_length_164_cov_1.669565_g60060_i0 PRJNA1137393 60576 164 1.669565 2.7380866 Ambidensovirus sp. 2050976 Viruses Viruses 58.5 3.35e-8   NR AWV66983.1 2050976 g60060 i0 45.1 1.82926829268293 51 28 93.3 0 1 153 368 418 AWV66983.1 Non-structural ORF [Ambidensovirus sp.] diamond 300 58.5 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Protoambidensovirus Protoambidensovirus incertum3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;