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contig_metadata

18 rows where analysis = "diamond", bioproject = "PRJNA1137393" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 18 ✖

bioproject 1

  • PRJNA1137393 · 18 ✖

analysis 1

  • diamond · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4111834 4111834 PRJNA1137393_P_NODE_60684_length_164_cov_1.530435_g60168_i0 PRJNA1137393 60684 164 1.530435 2.5099134 Chlorella sorokiniana 3076 Plants Plants 73.2 2.36e-13   NR PRW45196.1 3076 g60168 i0 67.3 3.80487804878049 52 15 95.1 1 164 9 536 585 PRW45196.1 26S proteasome non-ATPase regulatory subunit 1-like protein A-like [Chlorella sorokiniana] diamond 624 73.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
5387905 5387905 PRJNA1137393_P_NODE_32145_length_178_cov_1.511628_g31629_i0 PRJNA1137393 32145 178 1.511628 2.69069784 Trebouxia 13786 Plants Plants 113 3.4400000000000003e-29   NR KAA6424373.1 2608996 g31629 i0 98.3 2.93258426966292 58 1 97.8 0 176 3 98 155 KAA6424373.1 MAG: major light-harvesting chlorophyll a b [Trebouxia sp. A1-2] diamond 522 113 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
7937852 7937852 PRJNA1137393_P_NODE_64547_length_164_cov_0.878261_g64031_i0 PRJNA1137393 64547 164 0.878261 1.44034804 Coccomyxa viridis 1274662 Plants Plants 83.2 5.36e-17   NR CAL5226079.1 1274662 g64031 i0 96.3 0.98780487804878 54 2 98.8 0 162 1 252 305 CAL5226079.1 g8894 [Coccomyxa viridis] diamond 162 83.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
26975434 26975434 PRJNA1137393_P_NODE_40982_length_169_cov_0.866667_g40466_i0 PRJNA1137393 40982 169 0.866667 1.46466723 Coccomyxa viridis 1274662 Plants Plants 106 5.08e-25   NR CAL5224386.1 1274662 g40466 i0 100 0.994082840236686 56 0 99.4 0 168 1 171 226 CAL5224386.1 g7065 [Coccomyxa viridis] diamond 168 106 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
28333649 28333649 PRJNA1137393_P_NODE_11326_length_247_cov_1.929293_g10810_i0 PRJNA1137393 11326 247 1.929293 4.76535371 Coccomyxa sp. Obi 2315456 Plants Plants 71.2 5.45e-14   NR BDA48992.1 2315456 g10810 i0 76.6 0.57085020242915 47 11 57.1 0 243 103 43 89 BDA48992.1 hypothetical protein COCOBI_13-1020 [Coccomyxa sp. Obi] diamond 141 71.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
28838765 28838765 PRJNA1137393_P_NODE_45288_length_168_cov_0.873950_g44772_i0 PRJNA1137393 45288 168 0.87395 1.468236 Apatococcus lobatus 904363 Plants Plants 82.8 9.91e-17   NR KAK9817339.1 904363 g44772 i0 75.9 0.964285714285714 54 13 96.4 0 164 3 350 403 KAK9817339.1 hypothetical protein WJX74_001954 [Apatococcus lobatus] diamond 162 82.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Apatococcus Apatococcus lobatus
28901821 28901821 PRJNA1137393_P_NODE_34468_length_175_cov_1.301587_g33952_i0 PRJNA1137393 34468 175 1.301587 2.27777725 Coccomyxa viridis 1274662 Plants Plants 61.6 3.27e-9   NR CAL5218883.1 1274662 g33952 i0 80 0.685714285714286 40 6 65.1 1 175 62 365 404 CAL5218883.1 g620 [Coccomyxa viridis] diamond 120 61.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
29375594 29375594 PRJNA1137393_P_NODE_36489_length_172_cov_1.691057_g35973_i0 PRJNA1137393 36489 172 1.691057 2.90861804 Trebouxia sp. C 2796353 Plants Plants 49.3 7.05e-5   NR KAL3149619.1 3373145 g35973 i0 55.4 1.95348837209302 56 25 97.7 0 169 2 5 60 KAL3149619.1 Glycosylphosphatidylinositol anchor attachment 1 protein, variant 2 [Trebouxia sp. C0010 RCD-2024] diamond 336 49.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0010 RCD-2024
29901590 29901590 PRJNA1137393_P_NODE_72971_length_162_cov_0.920354_g72455_i0 PRJNA1137393 72971 162 0.920354 1.49097348 Chlorella 3071 Plants Plants 44.3 0.00352   NR PRW45024.1 3076 g72455 i0 84.6 0.962962962962963 26 4 48.1 0 80 3 17 42 PRW45024.1 dynamin-related GTPase isoform B [Chlorella sorokiniana] diamond 156 44.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
30153935 30153935 PRJNA1137393_P_NODE_12812_length_235_cov_1.118280_g12296_i0 PRJNA1137393 12812 235 1.11828 2.627958 Trebouxia 13786 Plants Plants 45.4 0.0033   NR KAA6424373.1 2608996 g12296 i0 90.9 0.561702127659575 22 2 28.1 0 234 169 227 248 KAA6424373.1 MAG: major light-harvesting chlorophyll a b [Trebouxia sp. A1-2] diamond 132 45.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
30291971 30291971 PRJNA1137393_P_NODE_57432_length_165_cov_0.896552_g56916_i0 PRJNA1137393 57432 165 0.896552 1.4793108 Trebouxia sp. C 2796353 Plants Plants 67 9.17e-12   NR KAL3137883.1 3373144 g56916 i0 94.4 0.654545454545455 36 2 65.5 0 165 58 90 125 KAL3137883.1 hypothetical protein ABBQ38_005135 [Trebouxia sp. C0009 RCD-2024] diamond 108 67 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0009 RCD-2024
30627933 30627933 PRJNA1137393_P_NODE_32813_length_177_cov_1.578125_g32297_i0 PRJNA1137393 32813 177 1.578125 2.79328125 root 1 Root_unresolved Root_unresolved 84.3 5.74e-18   NR KAF5842489.1 3046 g32297 i0 77.2 11.6949152542373 57 12 96.6 1 177 7 196 251 KAF5842489.1 coproporphyrinogen III oxidase [Dunaliella salina] diamond 2070 85.1 0.990599294947121 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
30765490 30765490 PRJNA1137393_P_NODE_21334_length_198_cov_1.395973_g20818_i0 PRJNA1137393 21334 198 1.395973 2.76402654 Coccomyxa viridis 1274662 Plants Plants 100 3.03e-24   NR CAK0735959.1 1274662 g20818 i0 76.3 0.893939393939394 59 14 89.4 0 178 2 4 62 CAK0735959.1 Chlorophyll a-b binding protein of LHCII type I, chloroplastic [Coccomyxa viridis] diamond 177 100 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
31133420 31133420 PRJNA1137393_P_NODE_45835_length_168_cov_0.873950_g45319_i0 PRJNA1137393 45835 168 0.87395 1.468236 Coccomyxa 41891 Plants Plants 60.5 4.3e-9   NR CAK0779787.1 1274662 g45319 i0 57.8 2.41071428571429 45 19 80.4 0 32 166 173 217 CAK0779787.1 hypothetical protein CVIRNUC_004852 [Coccomyxa viridis] diamond 405 60.8 0.995065789473684 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
31144186 31144186 PRJNA1137393_P_NODE_58695_length_165_cov_0.896552_g58179_i0 PRJNA1137393 58695 165 0.896552 1.4793108 Chlamydomonas eustigma 1157962 Plants Plants 51.6 9.47e-6   NR GAX73617.1 1157962 g58179 i0 71 1.12727272727273 31 9 56.4 0 94 2 113 143 GAX73617.1 hypothetical protein CEUSTIGMA_g1068.t1 [Chlamydomonas eustigma] diamond 186 51.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
31239326 31239326 PRJNA1137393_P_NODE_70715_length_162_cov_0.920354_g70199_i0 PRJNA1137393 70715 162 0.920354 1.49097348 Coccomyxa subellipsoidea C-169 574566 Plants Plants 56.6 1.55e-7   NR XP_005644720.1 574566 g70199 i0 64.4 0.833333333333333 45 16 83.3 0 26 160 857 901 XP_005644720.1 hypothetical protein COCSUDRAFT_18682, partial [Coccomyxa subellipsoidea C-169] diamond 135 56.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
31903614 31903614 PRJNA1137393_P_NODE_59437_length_165_cov_0.896552_g58921_i0 PRJNA1137393 59437 165 0.896552 1.4793108 Trebouxia sp. C 2796353 Plants Plants 47.8 2.18e-4   NR KAL3140147.1 3373144 g58921 i0 72.2 0.654545454545455 36 5 56.4 1 72 164 41 76 KAL3140147.1 hypothetical protein ABBQ38_004424 [Trebouxia sp. C0009 RCD-2024] diamond 108 47.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0009 RCD-2024
32788394 32788394 PRJNA1137393_P_NODE_27120_length_186_cov_1.350365_g26604_i0 PRJNA1137393 27120 186 1.350365 2.5116789 Carteria obtusa 69402 Plants Plants 99.8 3.0199999999999995e-23   NR BAC20448.1 69402 g26604 i0 87.8 1.58064516129032 49 6 79 0 148 2 124 172 BAC20448.1 P700 chlorophyll a-apoprotein A2, partial [Carteria obtusa] diamond 294 99.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Carteria Carteria obtusa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;