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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA1137393" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 12 ✖

bioproject 1

  • PRJNA1137393 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26880723 26880723 PRJNA1137393_P_NODE_69001_length_163_cov_0.912281_g68485_i0 PRJNA1137393 69001 163 0.912281 1.48701803 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 71.2 1.08e-12   NR HEY1063943.1 2973664 g68485 i0 66 0.975460122699387 53 18 97.5 0 1 159 237 289 HEY1063943.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 159 71.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27260102 27260102 PRJNA1137393_P_NODE_53123_length_166_cov_0.888889_g52607_i0 PRJNA1137393 53123 166 0.888889 1.47555574 Patescibacteria group bacterium 2052139 Bacteria Bacteria 45.8 3.2e-4   NR MCA0228232.1 2052139 g52607 i0 78.1 2.33132530120482 32 7 57.8 0 1 96 86 117 MCA0228232.1 30S ribosomal protein S6 [Patescibacteria group bacterium] diamond 387 45.8 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
27323302 27323302 PRJNA1137393_P_NODE_68923_length_163_cov_0.912281_g68407_i0 PRJNA1137393 68923 163 0.912281 1.48701803 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 100 2.9099999999999996e-23   NR MBP9667703.1 2026720 g68407 i0 88.9 0.993865030674847 54 6 99.4 0 2 163 363 416 MBP9667703.1 recombinase family protein [Candidatus Saccharibacteria bacterium] diamond 162 100 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27691617 27691617 PRJNA1137393_P_NODE_55924_length_165_cov_1.948276_g55408_i0 PRJNA1137393 55924 165 1.948276 3.2146554 Bacteria 2 Bacteria Bacteria 106 4.14e-25   NR NCC20352.1 2026720 g55408 i0 90.9 7 55 5 100 0 1 165 320 374 NCC20352.1 M1 family peptidase [Candidatus Saccharibacteria bacterium] diamond 1155 106 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28965330 28965330 PRJNA1137393_P_NODE_59108_length_165_cov_0.896552_g58592_i0 PRJNA1137393 59108 165 0.896552 1.4793108 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 84.3 2.42e-18   NR MEO5949493.1 1917697 g58592 i0 71.7 0.963636363636364 53 15 96.4 0 6 164 129 181 MEO5949493.1 phosphatase PAP2 family protein [Candidatus Saccharimonas sp.] diamond 159 84.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
29533504 29533504 PRJNA1137393_P_NODE_67610_length_163_cov_0.912281_g67094_i0 PRJNA1137393 67610 163 0.912281 1.48701803 Patescibacteria group bacterium 2052139 Bacteria Bacteria 75.1 4.89e-14   NR MBW7944192.1 2052139 g67094 i0 60.4 1.95092024539877 53 21 97.5 0 163 5 132 184 MBW7944192.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Patescibacteria group bacterium] diamond 318 75.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29691030 29691030 PRJNA1137393_P_NODE_63890_length_164_cov_0.904348_g63374_i0 PRJNA1137393 63890 164 0.904348 1.48313072 Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_ 1802132 Bacteria Bacteria 58.5 3.38e-8   NR OGL22522.1 1802132 g63374 i0 50 0.98780487804878 54 27 98.8 0 164 3 626 679 OGL22522.1 MAG: hypothetical protein A2707_04325 [Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_45_15] diamond 162 58.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RIFCSPHIGHO2_01_FULL_45_15
30007369 30007369 PRJNA1137393_P_NODE_28331_length_184_cov_1.451852_g27815_i0 PRJNA1137393 28331 184 1.451852 2.67140768 Patescibacteria group bacterium 2052139 Bacteria Bacteria 59.7 1.29e-8   NR MBU6231627.1 2052139 g27815 i0 46.3 0.880434782608696 54 29 88 0 164 3 33 86 MBU6231627.1 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein [Patescibacteria group bacterium] diamond 162 59.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31587529 31587529 PRJNA1137393_P_NODE_40216_length_169_cov_0.866667_g39700_i0 PRJNA1137393 40216 169 0.866667 1.46466723 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 101 1.3299999999999995e-23   NR HSI63942.1 2890869 g39700 i0 80.4 3.8698224852071 56 11 99.4 0 168 1 81 136 HSI63942.1 hypothetical protein [Candidatus Saccharimonadia bacterium] diamond 654 101 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
31650439 31650439 PRJNA1137393_P_NODE_72697_length_162_cov_0.920354_g72181_i0 PRJNA1137393 72697 162 0.920354 1.49097348 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 71.6 3.67e-13   NR MBA3723923.1 2052151 g72181 i0 59.3 1 54 22 100 0 162 1 50 103 MBA3723923.1 lamin tail domain-containing protein [Candidatus Levyibacteriota bacterium] diamond 162 71.6 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium
31840262 31840262 PRJNA1137393_P_NODE_70677_length_162_cov_0.920354_g70161_i0 PRJNA1137393 70677 162 0.920354 1.49097348 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 62 1.93e-9   NR MBP6962308.1 2026720 g70161 i0 52.8 1.96296296296296 53 25 98.1 0 2 160 98 150 MBP6962308.1 ComEC/Rec2 family competence protein [Candidatus Saccharibacteria bacterium] diamond 318 62 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32462371 32462371 PRJNA1137393_P_NODE_68859_length_163_cov_0.912281_g68343_i0 PRJNA1137393 68859 163 0.912281 1.48701803 Candidatus Saccharimonas 1331051 Bacteria Bacteria 89 8.18e-21   NR WP_015641906.1 1332188 g68343 i0 84.9 2.92638036809816 53 8 97.5 0 161 3 61 113 WP_015641906.1 transcription elongation factor GreA [Candidatus Saccharimonas aalborgensis] diamond 477 89 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas aalborgensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;