RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA1136957" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1136957 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28997039 28997039 PRJNA1136957_S_NODE_15608_length_220_cov_2.273292_g15511_i0 PRJNA1136957 15608 220 2.273292 5.0012424 Pseudomonas phage ER16 2917704 Viruses Viruses 87.8 2.84e-18   NR UNI73401.1 2917704 g15511 i0 64.3 0.954545454545455 70 25 95.5 0 6 215 273 342 UNI73401.1 hypothetical protein ER16_Medium3 [Pseudomonas phage ER16] diamond 210 87.8 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae   Pseudomonas phage ER16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;