contig_metadata
8 rows where analysis = "diamond", bioproject = "PRJNA1136957" and tax_phylum = "Bacillota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21961349 | 21961349 | PRJNA1136957_S_NODE_1698_length_498_cov_19.769932_g1602_i0 | PRJNA1136957 | 1698 | 498 | 19.769932 | 98.45426136 | root | 1 | Root_unresolved | Root_unresolved | 171 | 6.64e-51 | NR | MDJ8942385.1 | 1502 | g1602 | i0 | 79.4 | 1.8433734939759 | 102 | 21 | 61.4 | 0 | 495 | 190 | 94 | 195 | MDJ8942385.1 hypothetical protein [Clostridium perfringens] | diamond | 918 | 171 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium perfringens | ||
| 24510525 | 24510525 | PRJNA1136957_S_NODE_1560_length_510_cov_148.902439_g1465_i0 | PRJNA1136957 | 1560 | 510 | 148.902439 | 759.4024389 | root | 1 | Root_unresolved | Root_unresolved | 187 | 3.2800000000000004e-58 | NR | MRC56835.1 | 1428 | g1465 | i0 | 80 | 12.7117647058824 | 115 | 22 | 67.6 | 1 | 447 | 103 | 10 | 123 | MRC56835.1 50S ribosomal protein L30e [Bacillus thuringiensis] | diamond | 6483 | 188 | 0.99468085106383 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus thuringiensis | ||
| 26880710 | 26880710 | PRJNA1136957_S_NODE_3381_length_404_cov_19.742029_g3284_i0 | PRJNA1136957 | 3381 | 404 | 19.742029 | 79.75779716 | Bacillus thuringiensis | 1428 | Bacteria | Bacteria | 68.2 | 2.82e-12 | NR | MRA94196.1 | 1428 | g3284 | i0 | 50.9 | 0.423267326732673 | 57 | 28 | 42.3 | 0 | 4 | 174 | 12 | 68 | MRA94196.1 hypothetical protein [Bacillus thuringiensis] | diamond | 171 | 68.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus thuringiensis | ||
| 28554863 | 28554863 | PRJNA1136957_S_NODE_13847_length_232_cov_1.763006_g13750_i0 | PRJNA1136957 | 13847 | 232 | 1.763006 | 4.09017392 | Streptococcus agalactiae | 1311 | Bacteria | Bacteria | 40.4 | 0.0445 | NR | WP_341775314.1 | 1311 | g13750 | i0 | 57.1 | 0.362068965517241 | 28 | 12 | 36.2 | 0 | 86 | 169 | 25 | 52 | WP_341775314.1 reverse transcriptase domain-containing protein, partial [Streptococcus agalactiae] | diamond | 84 | 40.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus agalactiae | ||
| 29059971 | 29059971 | PRJNA1136957_S_NODE_21228_length_190_cov_2.160305_g21131_i0 | PRJNA1136957 | 21228 | 190 | 2.160305 | 4.1045795 | Syntrophomonadaceae bacterium | 2093811 | Bacteria | Bacteria | 52.8 | 5.15e-6 | NR | NLO21705.1 | 2093811 | g21131 | i0 | 57.9 | 2.4 | 38 | 16 | 60 | 0 | 188 | 75 | 13 | 50 | NLO21705.1 DEAD/DEAH box helicase [Syntrophomonadaceae bacterium] | diamond | 456 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Syntrophomonadaceae | Syntrophomonadaceae bacterium | |||
| 29407122 | 29407122 | PRJNA1136957_S_NODE_789_length_611_cov_2.594203_g711_i0 | PRJNA1136957 | 789 | 611 | 2.594203 | 15.85058033 | Bacillus thuringiensis | 1428 | Bacteria | Bacteria | 82.8 | 1.24e-16 | NR | MRA75726.1 | 1428 | g711 | i0 | 44.3 | 0.854337152209493 | 97 | 54 | 47.6 | 0 | 296 | 6 | 4 | 100 | MRA75726.1 hypothetical protein [Bacillus thuringiensis] | diamond | 522 | 82.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus thuringiensis | ||
| 29881013 | 29881013 | PRJNA1136957_S_NODE_18791_length_201_cov_1.119718_g18694_i0 | PRJNA1136957 | 18791 | 201 | 1.119718 | 2.25063318 | Hominilimicola | 3073565 | Bacteria | Bacteria | 53.5 | 5.05e-7 | NR | WP_022230028.1 | 3073565 | g18694 | i0 | 43.9 | 0.850746268656716 | 57 | 32 | 85.1 | 0 | 3 | 173 | 61 | 117 | WP_022230028.1 MULTISPECIES: hypothetical protein [Hominilimicola] | diamond | 171 | 53.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Hominilimicola | |||
| 31397714 | 31397714 | PRJNA1136957_S_NODE_1976_length_475_cov_3.278846_g1879_i0 | PRJNA1136957 | 1976 | 475 | 3.278846 | 15.5745185 | Ammoniphilus sp. YIM 78166 | 1644106 | Bacteria | Bacteria | 60.8 | 1.68e-7 | NR | WP_134702773.1 | 1644106 | g1879 | i0 | 49.1 | 0.334736842105263 | 53 | 26 | 32.8 | 1 | 437 | 282 | 317 | 369 | WP_134702773.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [Ammoniphilus sp. YIM 78166] | diamond | 159 | 60.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Ammoniphilus | Ammoniphilus sp. YIM 78166 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;