RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1136957" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA1136957 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27355016 27355016 PRJNA1136957_S_NODE_16403_length_215_cov_1.564103_g16306_i0 PRJNA1136957 16403 215 1.564103 3.36282145 Candidatus Delongbacteria bacterium 2044594 Bacteria Bacteria 55.8 5.94e-7   NR MBP7460195.1 2044594 g16306 i0 39.7 0.948837209302326 68 39 94.9 1 212 9 305 370 MBP7460195.1 hypothetical protein [Candidatus Delongbacteria bacterium] diamond 204 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium
32378371 32378371 PRJNA1136957_S_NODE_9039_length_281_cov_2.567568_g8942_i0 PRJNA1136957 9039 281 2.567568 7.21486608 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 55.1 2.74e-6   NR MFA6526862.1 2803731 g8942 i0 59.4 0.693950177935943 32 13 34.2 0 181 276 916 947 MFA6526862.1 isoleucine--tRNA ligase [Candidatus Babeliales bacterium] diamond 195 55.1 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;