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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA1136505" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 6 ✖

bioproject 1

  • PRJNA1136505 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26753518 26753518 PRJNA1136505_P_NODE_49481_length_447_cov_1.240642_g42622_i0 PRJNA1136505 49481 447 1.240642 5.54566974 Methanosarcinales archaeon 2250255 Archaea Archaea 169 1.3699999999999998e-48   NR RYE82365.1 2250255 g42622 i0 52.7 0.993288590604027 148 70 99.3 0 2 445 98 245 RYE82365.1 MAG: fatty acid desaturase, partial [Methanosarcinales archaeon] diamond 444 169 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales     Methanosarcinales archaeon
28238715 28238715 PRJNA1136505_P_NODE_59546_length_391_cov_1.452830_g52686_i0 PRJNA1136505 59546 391 1.45283 5.6805653 Thermoplasmatota archaeon 2806419 Archaea Archaea 46.2 0.011   NR MCL4332710.1 2806419 g52686 i0 45.7 0.537084398976982 70 34 51.4 3 79 279 346 414 MCL4332710.1 hypothetical protein [Thermoplasmatota archaeon] diamond 210 46.2 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
28997036 28997036 PRJNA1136505_P_NODE_98768_length_290_cov_1.308756_g91908_i0 PRJNA1136505 98768 290 1.308756 3.7953924 Haloglomus salinum 2962673 Archaea Archaea 44.7 0.0129   NR WP_254832223.1 2962673 g91908 i0 41.7 0.496551724137931 48 28 49.7 0 111 254 233 280 WP_254832223.1 glycosyltransferase family 2 protein [Haloglomus salinum] diamond 144 44.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Haloglomus Haloglomus salinum
29775005 29775005 PRJNA1136505_P_NODE_117531_length_266_cov_1.196891_g110671_i0 PRJNA1136505 117531 266 1.196891 3.18373006 root 1 Root_unresolved Root_unresolved 44.3 0.00578   NR TLZ98561.1 2026739 g110671 i0 48.3 4.4774436090225596 58 29 65.4 1 91 264 37 93 TLZ98561.1 MAG: hypothetical protein E6J96_02625, partial [Methanobacteriota archaeon] diamond 1191 44.7 0.991051454138702 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
29817476 29817476 PRJNA1136505_P_NODE_122011_length_260_cov_1.647059_g115151_i0 PRJNA1136505 122011 260 1.647059 4.2823534 Natronobacterium texcoconense 1095778 Archaea Archaea 42 0.0361   NR SDR00529.1 1095778 g115151 i0 32.1 0.934615384615385 81 52 93.5 2 258 16 8 85 SDR00529.1 Cupin domain-containing protein [Natronobacterium texcoconense] diamond 243 42 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronobacterium Natronobacterium texcoconense
30638947 30638947 PRJNA1136505_P_NODE_109373_length_276_cov_1.472906_g102513_i0 PRJNA1136505 109373 276 1.472906 4.06522056 Methanobacterium sp. PtaU1.Bin 2164 Archaea Archaea 179 4.84e-53   NR OPY19829.1 1811675 g102513 i0 100 1 92 0 100 0 1 276 232 323 OPY19829.1 MAG: DNA-directed RNA polymerase subunit A'' [Methanobacterium sp. PtaU1.Bin097] diamond 276 179 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp. PtaU1.Bin097

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;