RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

41 rows where analysis = "diamond", bioproject = "PRJNA1134759" and tax_phylum = "Pseudomonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Pseudomonadota · 41 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1134759 · 41 ✖

analysis 1

  • diamond · 41 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
284075 284075 PRJNA1134759_P_NODE_17941_length_379_cov_1.908497_g17765_i0 PRJNA1134759 17941 379 1.908497 7.23320363 Gammaproteobacteria 1236 Bacteria Bacteria 241 3.47e-77   NR WP_115167958.1 587 g17765 i0 93.7 10.9630606860158 126 8 99.7 0 378 1 172 297 WP_115167958.1 polysaccharide biosynthesis protein [Providencia rettgeri] diamond 4155 241 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Morganellaceae Providencia Providencia rettgeri
284192 284192 PRJNA1134759_P_NODE_51421_length_249_cov_0.886364_g51245_i0 PRJNA1134759 51421 249 0.886364 2.20704636 Aquabacterium 92793 Bacteria Bacteria 144 7.729999999999999e-38   NR WP_035041724.1 1538295 g51245 i0 87.8 2.96385542168675 82 10 98.8 0 248 3 70 151 WP_035041724.1 acetyl-CoA carboxylase family protein [Aquabacterium sp. NJ1] diamond 738 144 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Aquabacterium Aquabacterium sp. NJ1
4111223 4111223 PRJNA1134759_P_NODE_52124_length_248_cov_0.891429_g51948_i0 PRJNA1134759 52124 248 0.891429 2.21074392 Gammaproteobacteria 1236 Bacteria Bacteria 164 6.21e-50   NR MCV5388136.1 562 g51948 i0 97.6 18.8346774193548 82 2 99.2 0 2 247 55 136 MCV5388136.1 RNA polymerase factor sigma-54 [Escherichia coli] diamond 4671 164 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
4859933 4859933 PRJNA1134759_P_NODE_25944_length_325_cov_1.547619_g25768_i0 PRJNA1134759 25944 325 1.547619 5.02976175 Plesiomonas shigelloides 703 Bacteria Bacteria 143 1.84e-37   NR WP_152148481.1 703 g25768 i0 100 0.655384615384615 71 0 65.5 0 323 111 515 585 WP_152148481.1 1-deoxy-D-xylulose-5-phosphate synthase [Plesiomonas shigelloides] diamond 213 143 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Plesiomonas Plesiomonas shigelloides
5387309 5387309 PRJNA1134759_P_NODE_2205_length_955_cov_4.755102_g2089_i0 PRJNA1134759 2205 955 4.755102 45.4112241 Aeromonas veronii 654 Bacteria Bacteria 512 1.11e-181   NR WP_236280644.1 654 g2089 i0 99.6 0.816753926701571 260 1 81.7 0 812 33 1 260 WP_236280644.1 ParA family protein [Aeromonas veronii] diamond 780 512 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Aeromonadales Aeromonadaceae Aeromonas Aeromonas veronii
5387435 5387435 PRJNA1134759_P_NODE_55845_length_243_cov_0.917647_g55669_i0 PRJNA1134759 55845 243 0.917647 2.22988221 Francisella sp. 2047875 Bacteria Bacteria 115 5.42e-30   NR PZU04818.1 2047875 g55669 i0 95.1 0.753086419753086 61 3 75.3 0 60 242 141 201 PZU04818.1 MAG: 50S ribosomal protein L1 [Francisella sp.] diamond 183 115 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Thiotrichales Francisellaceae Francisella Francisella sp.
6134721 6134721 PRJNA1134759_P_NODE_20105_length_361_cov_1.625000_g19929_i0 PRJNA1134759 20105 361 1.625 5.86625 Salmonella 590 Bacteria Bacteria 182 8.329999999999999e-52   NR ECG1798687.1 57045 g19929 i0 74.8 2.96675900277008 119 30 98.9 0 358 2 410 528 ECG1798687.1 hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi B] diamond 1071 182 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Salmonella Salmonella enterica
6134731 6134731 PRJNA1134759_P_NODE_52785_length_247_cov_0.896552_g52609_i0 PRJNA1134759 52785 247 0.896552 2.21448344 Pseudomonadota 1224 Bacteria Bacteria 159 2.8899999999999996e-47   NR WP_153061389.1 562 g52609 i0 100 3.93522267206478 81 0 98.4 0 245 3 41 121 WP_153061389.1 response regulator, partial [Escherichia coli] diamond 972 159 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
10487710 10487710 PRJNA1134759_P_NODE_48849_length_253_cov_0.866667_g48673_i0 PRJNA1134759 48849 253 0.866667 2.19266751 Tepidimonas fonticaldi 1101373 Bacteria Bacteria 159 3.22e-48   NR WP_143968796.1 1101373 g48673 i0 98.8 0.99604743083004 84 1 99.6 0 253 2 8 91 WP_143968796.1 sirohydrochlorin chelatase [Tepidimonas fonticaldi] diamond 252 159 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Tepidimonas Tepidimonas fonticaldi
14312996 14312996 PRJNA1134759_P_NODE_16732_length_391_cov_1.723270_g16556_i0 PRJNA1134759 16732 391 1.72327 6.7379857 Motilimonas sp. E26 2865674 Bacteria Bacteria 143 4.9399999999999986e-40   NR WP_232803376.1 2865674 g16556 i0 94.7 2.9079283887468 75 4 57.5 0 387 163 152 226 WP_232803376.1 cytidylyltransferase domain-containing protein [Motilimonas sp. E26] diamond 1137 143 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales   Motilimonas Motilimonas sp. E26
15587034 15587034 PRJNA1134759_P_NODE_32033_length_298_cov_2.182222_g31857_i0 PRJNA1134759 32033 298 2.182222 6.50302156 Plesiomonas shigelloides 703 Bacteria Bacteria 199 4.68e-62   NR WP_152109014.1 703 g31857 i0 100 0.996644295302013 99 0 99.7 0 1 297 33 131 WP_152109014.1 SDR family NAD(P)-dependent oxidoreductase [Plesiomonas shigelloides] diamond 297 199 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Plesiomonas Plesiomonas shigelloides
22708772 22708772 PRJNA1134759_P_NODE_50838_length_250_cov_0.881356_g50662_i0 PRJNA1134759 50838 250 0.881356 2.20339 Plesiomonas 702 Bacteria Bacteria 153 1.7899999999999996e-43   NR WP_064977397.1 702 g50662 i0 95.1 3.936 82 4 98.4 0 248 3 91 172 WP_064977397.1 MULTISPECIES: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) [Plesiomonas] diamond 984 153 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Plesiomonas  
26721745 26721745 PRJNA1134759_P_NODE_48801_length_253_cov_0.866667_g48625_i0 PRJNA1134759 48801 253 0.866667 2.19266751 Francisella sp. 2047875 Bacteria Bacteria 149 1.42e-39   NR PZU04479.1 2047875 g48625 i0 98.6 0.877470355731225 74 1 87.7 0 224 3 688 761 PZU04479.1 MAG: urea carboxylase [Francisella sp.] diamond 222 149 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Thiotrichales Francisellaceae Francisella Francisella sp.
26943700 26943700 PRJNA1134759_P_NODE_57502_length_236_cov_2.141104_g57326_i0 PRJNA1134759 57502 236 2.141104 5.05300544 Vibrio mytili 50718 Bacteria Bacteria 167 5.48e-49   NR WP_041155032.1 50718 g57326 i0 100 0.991525423728814 78 0 99.2 0 1 234 20 97 WP_041155032.1 WD40 repeat domain-containing protein [Vibrio mytili] diamond 234 167 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio mytili
27165010 27165010 PRJNA1134759_P_NODE_53522_length_246_cov_0.901734_g53346_i0 PRJNA1134759 53522 246 0.901734 2.21826564 Stenotrophomonas sp. GD 69392 Bacteria Bacteria 120 2.4599999999999996e-29   NR WP_279924866.1 2975363 g53346 i0 76.5 0.98780487804878 81 19 98.8 0 4 246 719 799 WP_279924866.1 hypothetical protein [Stenotrophomonas sp. GD03657] diamond 243 120 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Stenotrophomonas Stenotrophomonas sp. GD03657
27217200 27217200 PRJNA1134759_P_NODE_5602_length_638_cov_1.784071_g5435_i0 PRJNA1134759 5602 638 1.784071 11.38237298 Enterobacteriaceae 543 Bacteria Bacteria 70.1 4.31e-10   NR WP_346725658.1 562 g5435 i0 39.2 0.912225705329154 97 58 45.1 1 292 5 301 397 WP_346725658.1 hypothetical protein [Escherichia coli] diamond 582 70.1 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
27323265 27323265 PRJNA1134759_P_NODE_34463_length_290_cov_0.995392_g34287_i0 PRJNA1134759 34463 290 0.995392 2.8866368 Burkholderiaceae bacterium 2030806 Bacteria Bacteria 43.1 0.00599   NR MFL6677505.1 2030806 g34287 i0 52.8 1.11724137931034 36 17 37.2 0 278 171 19 54 MFL6677505.1 cysteine-rich CWC family protein [Burkholderiaceae bacterium] diamond 324 43.1 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae   Burkholderiaceae bacterium
27386613 27386613 PRJNA1134759_P_NODE_47543_length_255_cov_1.527473_g47367_i0 PRJNA1134759 47543 255 1.527473 3.89505615 Aeromonas salmonicida 645 Bacteria Bacteria 140 2.58e-36   NR WP_087757607.1 645 g47367 i0 75 0.988235294117647 84 21 98.8 0 253 2 1312 1395 WP_087757607.1 conjugative transfer relaxase/helicase TraI [Aeromonas salmonicida] diamond 252 140 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Aeromonadales Aeromonadaceae Aeromonas Aeromonas salmonicida
27501997 27501997 PRJNA1134759_P_NODE_54263_length_245_cov_0.906977_g54087_i0 PRJNA1134759 54263 245 0.906977 2.22209365 Escherichia 561 Bacteria Bacteria 130 1.18e-37   NR EFA2852404.1 562 g54087 i0 100 1.56734693877551 64 0 78.4 0 53 244 1 64 EFA2852404.1 hypothetical protein [Escherichia coli] diamond 384 130 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
28712618 28712618 PRJNA1134759_P_NODE_52887_length_247_cov_0.896552_g52711_i0 PRJNA1134759 52887 247 0.896552 2.21448344 Paracoccus marinus 288426 Bacteria Bacteria 153 2.3499999999999994e-42   NR WP_185961947.1 288426 g52711 i0 97.4 0.947368421052632 78 2 94.7 0 14 247 1 78 WP_185961947.1 cardiolipin synthase [Paracoccus marinus] diamond 234 153 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodobacterales Paracoccaceae Paracoccus Paracoccus marinus
28775614 28775614 PRJNA1134759_P_NODE_22287_length_346_cov_1.710623_g22111_i0 PRJNA1134759 22287 346 1.710623 5.91875558 Alphaproteobacteria bacterium 1913988 Bacteria Bacteria 140 8.189999999999999e-37   NR MEE9140510.1 1913988 g22111 i0 55.3 0.988439306358382 114 51 98.8 0 346 5 249 362 MEE9140510.1 phage portal protein [Alphaproteobacteria bacterium] diamond 342 140 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       Alphaproteobacteria bacterium
28997017 28997017 PRJNA1134759_P_NODE_50128_length_251_cov_0.876404_g49952_i0 PRJNA1134759 50128 251 0.876404 2.19977404 Variovorax sp. 1871043 Bacteria Bacteria 84 1.29e-16   NR MEJ7686308.1 1871043 g49952 i0 56.8 2.96414342629482 81 30 96.8 1 247 5 556 631 MEJ7686308.1 DUF3971 domain-containing protein [Variovorax sp.] diamond 744 84 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Variovorax Variovorax sp.
29059954 29059954 PRJNA1134759_P_NODE_52208_length_248_cov_0.891429_g52032_i0 PRJNA1134759 52208 248 0.891429 2.21074392 Methylibium sp. 2067992 Bacteria Bacteria 164 3.49e-45   NR MBA4215769.1 2067992 g52032 i0 100 0.991935483870968 82 0 99.2 0 247 2 508 589 MBA4215769.1 TonB-dependent receptor [Methylibium sp.] diamond 246 164 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Methylibium Methylibium sp.
29375571 29375571 PRJNA1134759_P_NODE_46309_length_258_cov_1.243243_g46133_i0 PRJNA1134759 46309 258 1.243243 3.20756694 Vibrio japonicus 1824638 Bacteria Bacteria 42 0.00718   NR WP_257083277.1 1824638 g46133 i0 71.4 0.63953488372093 28 7 31.4 1 109 29 21 48 WP_257083277.1 hypothetical protein [Vibrio japonicus] diamond 165 42 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio japonicus
29881004 29881004 PRJNA1134759_P_NODE_55831_length_243_cov_0.917647_g55655_i0 PRJNA1134759 55831 243 0.917647 2.22988221 Vibrio mytili 50718 Bacteria Bacteria 157 1.57e-45   NR WP_331438585.1 50718 g55655 i0 100 0.987654320987654 80 0 98.8 0 3 242 138 217 WP_331438585.1 co-chaperone YbbN [Vibrio mytili] diamond 240 157 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio mytili
29975585 29975585 PRJNA1134759_P_NODE_55131_length_244_cov_0.912281_g54955_i0 PRJNA1134759 55131 244 0.912281 2.22596564 Phenylobacterium sp. 1871053 Bacteria Bacteria 48.9 2.63e-5   NR HVK40877.1 1871053 g54955 i0 85.2 0.331967213114754 27 4 33.2 0 147 227 1 27 HVK40877.1 DUF1134 domain-containing protein [Phenylobacterium sp.] diamond 81 48.9 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Phenylobacterium Phenylobacterium sp.
31050128 31050128 PRJNA1134759_P_NODE_43475_length_264_cov_2.434555_g43299_i0 PRJNA1134759 43475 264 2.434555 6.4272252 Aeromonas veronii 654 Bacteria Bacteria 112 1.27e-29   NR WP_236280647.1 654 g43299 i0 100 0.659090909090909 58 0 65.9 0 91 264 1 58 WP_236280647.1 hypothetical protein [Aeromonas veronii] diamond 174 112 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Aeromonadales Aeromonadaceae Aeromonas Aeromonas veronii
31050130 31050130 PRJNA1134759_P_NODE_8495_length_532_cov_1.261438_g8319_i0 PRJNA1134759 8495 532 1.261438 6.71085016 Plesiomonas shigelloides 703 Bacteria Bacteria 362 1.4399999999999999e-124   NR WP_218573764.1 703 g8319 i0 99.4 0.99812030075188 177 1 99.8 0 532 2 15 191 WP_218573764.1 class I SAM-dependent methyltransferase [Plesiomonas shigelloides] diamond 531 362 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Plesiomonas Plesiomonas shigelloides
31239296 31239296 PRJNA1134759_P_NODE_9615_length_502_cov_1.382284_g9439_i0 PRJNA1134759 9615 502 1.382284 6.93906568 Paracidovorax avenae 80867 Bacteria Bacteria 47.4 0.0106   NR AVS68981.1 80867 g9439 i0 51.4 0.418326693227092 70 30 41.2 2 256 50 52 118 AVS68981.1 hypothetical protein C8245_24750 [Paracidovorax avenae] diamond 210 47.4 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Paracidovorax Paracidovorax avenae
31271095 31271095 PRJNA1134759_P_NODE_2055_length_985_cov_1.695175_g1942_i0 PRJNA1134759 2055 985 1.695175 16.69747375 Photobacterium sp. GSS17 3020715 Bacteria Bacteria 151 3.98e-41   NR WP_273860674.1 3020715 g1942 i0 51 0.465989847715736 153 71 46.6 1 525 983 8 156 WP_273860674.1 hypothetical protein [Photobacterium sp. GSS17] diamond 459 151 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Photobacterium Photobacterium sp. GSS17
31302674 31302674 PRJNA1134759_P_NODE_28095_length_315_cov_1.037190_g27919_i0 PRJNA1134759 28095 315 1.03719 3.2671485 Vibrio harveyi 669 Bacteria Bacteria 176 9.55e-52   NR WP_085319888.1 669 g27919 i0 84.6 0.990476190476191 104 16 99 0 1 312 12 115 WP_085319888.1 UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [Vibrio harveyi] diamond 312 176 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio harveyi
31323269 31323269 PRJNA1134759_P_NODE_55875_length_243_cov_0.917647_g55699_i0 PRJNA1134759 55875 243 0.917647 2.22988221 Snodgrassella 1193515 Bacteria Bacteria 112 9.23e-28   NR WP_100138871.1 1196083 g55699 i0 70 4.90123456790123 80 24 98.8 0 241 2 205 284 WP_100138871.1 major capsid family protein [Snodgrassella alvi] diamond 1191 112 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Neisseriales Neisseriaceae Snodgrassella Snodgrassella alvi
31418219 31418219 PRJNA1134759_P_NODE_48816_length_253_cov_0.866667_g48640_i0 PRJNA1134759 48816 253 0.866667 2.19266751 Legionella 445 Bacteria Bacteria 121 8.92e-33   NR TIE04951.1 446 g48640 i0 72.6 5.94071146245059 84 23 99.6 0 1 252 47 130 TIE04951.1 biotin-independent malonate decarboxylase subunit beta, partial [Legionella pneumophila] diamond 1503 121 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Legionellales Legionellaceae Legionella Legionella pneumophila
31745382 31745382 PRJNA1134759_P_NODE_47997_length_254_cov_1.596685_g47821_i0 PRJNA1134759 47997 254 1.596685 4.0555799 Sphingomonas sp. 7/4-4 3018446 Bacteria Bacteria 42.7 0.0404   NR WP_271237618.1 3018446 g47821 i0 42.9 0.661417322834646 56 29 63.8 2 18 179 205 259 WP_271237618.1 TOMM precursor leader peptide-binding protein [Sphingomonas sp. 7/4-4] diamond 168 42.7 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. 7/4-4
31840231 31840231 PRJNA1134759_P_NODE_25017_length_330_cov_1.431907_g24841_i0 PRJNA1134759 25017 330 1.431907 4.7252931 Vibrio coralliirubri 1516159 Bacteria Bacteria 189 2.1499999999999996e-56   NR WP_333008290.1 1516159 g24841 i0 90.7 1.97272727272727 108 10 98.2 0 2 325 265 372 WP_333008290.1 polysaccharide pyruvyl transferase family protein [Vibrio coralliirubri] diamond 651 189 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio coralliirubri
31935167 31935167 PRJNA1134759_P_NODE_36837_length_282_cov_1.866029_g36661_i0 PRJNA1134759 36837 282 1.866029 5.26220178 Vibrio parahaemolyticus 670 Bacteria Bacteria 165 2.0599999999999995e-47   NR EID7696663.1 670 g36661 i0 90.3 2.96808510638298 93 9 98.9 0 3 281 261 353 EID7696663.1 O-antigen ligase family protein [Vibrio parahaemolyticus] diamond 837 165 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Vibrionales Vibrionaceae Vibrio Vibrio parahaemolyticus
32315339 32315339 PRJNA1134759_P_NODE_54359_length_245_cov_0.906977_g54183_i0 PRJNA1134759 54359 245 0.906977 2.22209365 uncultured Sphingomonas sp. 158754 Bacteria Bacteria 166 6.71e-48   NR WP_296223069.1 158754 g54183 i0 91.4 0.991836734693878 81 7 99.2 0 2 244 263 343 WP_296223069.1 PBSX family phage terminase large subunit [uncultured Sphingomonas sp.] diamond 243 166 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas uncultured Sphingomonas sp.
32536672 32536672 PRJNA1134759_P_NODE_52219_length_248_cov_0.891429_g52043_i0 PRJNA1134759 52219 248 0.891429 2.21074392 Salmonella enterica 28901 Bacteria Bacteria 154 5.309999999999999e-46   NR HBZ5728148.1 57743 g52043 i0 92.5 0.967741935483871 80 6 96.8 0 240 1 1 80 HBZ5728148.1 hypothetical protein [Salmonella enterica subsp. enterica serovar Weltevreden] diamond 240 154 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Salmonella Salmonella enterica
32568362 32568362 PRJNA1134759_P_NODE_48799_length_253_cov_0.866667_g48623_i0 PRJNA1134759 48799 253 0.866667 2.19266751 Shewanella baltica 62322 Bacteria Bacteria 96.7 2.9700000000000003e-21   NR WP_006082368.1 62322 g48623 i0 56.8 0.960474308300395 81 35 96 0 245 3 218 298 WP_006082368.1 O-antigen polymerase [Shewanella baltica] diamond 243 96.7 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales Shewanellaceae Shewanella Shewanella baltica
32599675 32599675 PRJNA1134759_P_NODE_56640_length_242_cov_0.923077_g56464_i0 PRJNA1134759 56640 242 0.923077 2.23384634 Roseateles sp. 1971397 Bacteria Bacteria 165 2.38e-48   NR WP_373716428.1 1971397 g56464 i0 100 0.991735537190083 80 0 99.2 0 3 242 55 134 WP_373716428.1 NAD(P)H-quinone oxidoreductase [Roseateles sp.] diamond 240 165 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Roseateles sp.
32788372 32788372 PRJNA1134759_P_NODE_54220_length_245_cov_0.906977_g54044_i0 PRJNA1134759 54220 245 0.906977 2.22209365 Aureimonas sp. AU22 1638162 Bacteria Bacteria 48.5 3.14e-4   NR WP_061934978.1 1638162 g54044 i0 90.5 0.257142857142857 21 2 25.7 0 182 244 1 21 WP_061934978.1 choline ABC transporter permease subunit [Aureimonas sp. AU22] diamond 63 48.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Aurantimonadaceae Aureimonas Aureimonas sp. AU22

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;