RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1134759" and tax_clade = "FCB group"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA1134759 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27702501 27702501 PRJNA1134759_P_NODE_36224_length_284_cov_1.478673_g36048_i0 PRJNA1134759 36224 284 1.478673 4.19943132 Psychroflexus maritimus 2714865 Bacteria Bacteria 60.1 2.25e-8   NR WP_166399436.1 2714865 g36048 i0 73.7 0.401408450704225 38 10 40.1 0 112 225 21 58 WP_166399436.1 YjjG family noncanonical pyrimidine nucleotidase [Psychroflexus maritimus] diamond 114 60.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Psychroflexus Psychroflexus maritimus
32220123 32220123 PRJNA1134759_P_NODE_52138_length_248_cov_0.891429_g51962_i0 PRJNA1134759 52138 248 0.891429 2.21074392 Chitinophagaceae bacterium LWZ2-11 3369651 Bacteria Bacteria 103 2.94e-25   NR MFL9483608.1 3369651 g51962 i0 100 0.629032258064516 52 0 62.9 0 247 92 88 139 MFL9483608.1 GDSL-type esterase/lipase family protein [Chitinophagaceae bacterium LWZ2-11] diamond 156 103 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium LWZ2-11
32568361 32568361 PRJNA1134759_P_NODE_42539_length_267_cov_1.082474_g42363_i0 PRJNA1134759 42539 267 1.082474 2.89020558 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 150 4.71e-43   NR MBI1810157.1 2026742 g42363 i0 92.4 2.66292134831461 79 6 88.8 0 266 30 121 199 MBI1810157.1 glycosyltransferase [Gemmatimonadota bacterium] diamond 711 150 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
32820002 32820002 PRJNA1134759_P_NODE_56520_length_242_cov_0.923077_g56344_i0 PRJNA1134759 56520 242 0.923077 2.23384634 Bacteroidales bacterium 2030927 Bacteria Bacteria 46.2 0.00223   NR MFO7827238.1 2030927 g56344 i0 44 0.619834710743802 50 28 62 0 216 67 606 655 MFO7827238.1 reverse transcriptase domain-containing protein [Bacteroidales bacterium] diamond 150 46.2 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;