RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1132896" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1132896 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26721735 26721735 PRJNA1132896_P_NODE_6301_length_256_cov_1.683060_g6210_i0 PRJNA1132896 6301 256 1.68306 4.3086336 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 47.4 0.00109   NR KAJ4456954.1 342808 g6210 i0 37.5 0.9375 80 38 87.9 3 252 28 7852 7924 KAJ4456954.1 putative low-density lipoprotein receptor-related protein [Paratrimastix pyriformis] diamond 240 47.4 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
28933600 28933600 PRJNA1132896_P_NODE_1448_length_437_cov_4.879121_g1357_i0 PRJNA1132896 1448 437 4.879121 21.32175877 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 79 4.54e-14   NR KAJ4459686.1 342808 g1357 i0 32.4 1.97025171624714 139 91 94.1 3 413 3 159 296 KAJ4459686.1 phosphatidylcholine transfer protein [Paratrimastix pyriformis] diamond 861 79 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;