RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1132896" and tax_phylum = "Candidatus Zixiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Zixiibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1132896 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28460121 28460121 PRJNA1132896_P_NODE_10226_length_241_cov_0.916667_g10135_i0 PRJNA1132896 10226 241 0.916667 2.20916747 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 45.8 0.00305   NR MDH4157894.1 2053527 g10135 i0 48.9 0.560165975103734 45 23 56 0 50 184 663 707 MDH4157894.1 protein kinase [Candidatus Zixiibacteriota bacterium] diamond 135 45.8 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium
32378337 32378337 PRJNA1132896_P_NODE_8059_length_247_cov_1.551724_g7968_i0 PRJNA1132896 8059 247 1.551724 3.83275828 Candidatus Zixiibacteriota bacterium 2053527 Bacteria Bacteria 68.2 6.84e-12   NR NLI15892.1 2053527 g7968 i0 100 0.364372469635628 30 0 36.4 0 246 157 155 184 NLI15892.1 Appr-1-p processing protein [Candidatus Zixiibacteriota bacterium] diamond 90 68.2 1 Bacteria FCB group Pseudomonadati Candidatus Zixiibacteriota         Candidatus Zixiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;