RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1129273" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 9 ✖

bioproject 1

  • PRJNA1129273 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27323232 27323232 PRJNA1129273_P_NODE_6043_length_288_cov_1.413953_g5763_i0 PRJNA1129273 6043 288 1.413953 4.07218464 Microbacterium phage Pumpernickel 2885983 Viruses Viruses 50.1 4.84e-5   NR YP_010755093.1 2885983 g5763 i0 88 0.260416666666667 25 3 26 0 76 2 1 25 YP_010755093.1 hypothetical protein QEH42_gp062 [Microbacterium phage Pumpernickel] diamond 75 50.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Pumpernickelvirus Pumpernickelvirus pumpernickel
27765490 27765490 PRJNA1129273_P_NODE_10764_length_239_cov_2.090361_g10484_i0 PRJNA1129273 10764 239 2.090361 4.99596279 Hubei picorna-like virus 14 1923093 Viruses Viruses 110 5.12e-26   NR YP_009337314.1 1923093 g10484 i0 67.9 0.97907949790795 78 25 97.9 0 1 234 647 724 YP_009337314.1 hypothetical protein 2 [Hubei picorna-like virus 14] diamond 234 110 1 Viruses               Hubei picorna-like virus 14
28080930 28080930 PRJNA1129273_P_NODE_7425_length_266_cov_2.362694_g7145_i0 PRJNA1129273 7425 266 2.362694 6.28476604 Hubei picorna-like virus 14 1923093 Viruses Viruses 139 5.71e-36   NR YP_009337313.1 1923093 g7145 i0 88 0.845864661654135 75 9 84.6 0 227 3 1206 1280 YP_009337313.1 hypothetical protein 1 [Hubei picorna-like virus 14] diamond 225 139 1 Viruses               Hubei picorna-like virus 14
28112497 28112497 PRJNA1129273_P_NODE_2905_length_441_cov_1.524457_g2626_i0 PRJNA1129273 2905 441 1.524457 6.72285537 Hubei picorna-like virus 14 1923093 Viruses Viruses 267 9.09e-80   NR YP_009337313.1 1923093 g2626 i0 85.6 0.993197278911565 146 21 99.3 0 1 438 1514 1659 YP_009337313.1 hypothetical protein 1 [Hubei picorna-like virus 14] diamond 438 267 1 Viruses               Hubei picorna-like virus 14
28523177 28523177 PRJNA1129273_P_NODE_7367_length_267_cov_1.582474_g7087_i0 PRJNA1129273 7367 267 1.582474 4.22520558 Hubei picorna-like virus 14 1923093 Viruses Viruses 167 4.14e-46   NR YP_009337314.1 1923093 g7087 i0 89.8 0.98876404494382 88 9 98.9 0 3 266 332 419 YP_009337314.1 hypothetical protein 2 [Hubei picorna-like virus 14] diamond 264 167 1 Viruses               Hubei picorna-like virus 14
29123285 29123285 PRJNA1129273_P_NODE_9389_length_247_cov_1.787356_g9109_i0 PRJNA1129273 9389 247 1.787356 4.41476932 Arthrobacter phage 1191A 3053731 Viruses Viruses 97.4 5.83e-23   NR WJZ27838.1 3053731 g9109 i0 53.7 0.995951417004049 82 38 99.6 0 1 246 51 132 WJZ27838.1 DNA invertase [Arthrobacter phage 1191A] diamond 246 97.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Arthrobacter phage 1191A
29280685 29280685 PRJNA1129273_P_NODE_2029_length_561_cov_1.331967_g1755_i0 PRJNA1129273 2029 561 1.331967 7.47233487 Hubei picorna-like virus 14 1923093 Viruses Viruses 240 1.55e-69   NR YP_009337313.1 1923093 g1755 i0 62.6 1 187 69 99.5 1 2 559 702 888 YP_009337313.1 hypothetical protein 1 [Hubei picorna-like virus 14] diamond 561 240 1 Viruses               Hubei picorna-like virus 14
31133397 31133397 PRJNA1129273_P_NODE_10415_length_243_cov_0.894118_g10135_i0 PRJNA1129273 10415 243 0.894118 2.17270674 Ophiovirus 88129 Viruses Viruses 108 2.56e-26   NR UYD21356.1 2979639 g10135 i0 58 2 81 34 100 0 1 243 102 182 UYD21356.1 hypothetical protein [Colletotrichum associated negative-sense single-stranded RNA virus 2] diamond 486 108 1 Viruses   Orthornavirae Negarnaviricota         Colletotrichum associated negative-sense single-stranded RNA virus 2
31429113 31429113 PRJNA1129273_P_NODE_7096_length_271_cov_1.166667_g6816_i0 PRJNA1129273 7096 271 1.166667 3.16166757 Sphingomonas phage Scott 2282912 Viruses Viruses 160 7.61e-47   NR YP_009807879.1 2282912 g6816 i0 86.5 0.985239852398524 89 12 98.5 0 4 270 145 233 YP_009807879.1 DNA ligase [Sphingomonas phage Scott] diamond 267 160 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Autographivirales Autonotataviridae Scottvirus Scottvirus scott

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;