RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1129273" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1129273 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27164978 27164978 PRJNA1129273_P_NODE_482_length_1286_cov_4.295136_g334_i0 PRJNA1129273 482 1286 4.295136 55.23544896 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 99.4 1.61e-18   NR PAA86220.1 282301 g334 i0 32.9 0.375583203732504 161 107 37.3 1 652 1131 76 236 PAA86220.1 hypothetical protein BOX15_Mlig009159g3 [Macrostomum lignano] diamond 483 99.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
27659837 27659837 PRJNA1129273_P_NODE_6264_length_284_cov_2.824645_g5984_i0 PRJNA1129273 6264 284 2.824645 8.0219918 Metazoa 33208 Platyhelminthes Platyhelminthes 59.7 4.8e-9   NR VDK25536.1 60517 g5984 i0 52.3 2.4612676056338 65 31 68.7 0 283 89 17 81 VDK25536.1 unnamed protein product [Taenia asiatica] diamond 699 59.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Taenia Taenia asiatica
32819967 32819967 PRJNA1129273_P_NODE_2800_length_453_cov_1.410526_g2522_i0 PRJNA1129273 2800 453 1.410526 6.38968278 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 59.7 4.04e-7   NR PAA93599.1 282301 g2522 i0 27.8 1.66887417218543 126 84 82.8 3 400 26 501 620 PAA93599.1 hypothetical protein BOX15_Mlig000053g1 [Macrostomum lignano] diamond 756 59.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;