RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA1129273" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1129273 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9211236 9211236 PRJNA1129273_P_NODE_10948_length_233_cov_2.193750_g10668_i0 PRJNA1129273 10948 233 2.19375 5.1114375 Fungi 4751 Fungi Fungi 108 4.75e-26   NR XP_069242005.1 4840 g10668 i0 72.9 10.6480686695279 70 19 90.1 0 2 211 198 267 XP_069242005.1 60S ribosomal protein uL4 [Rhizomucor pusillus] diamond 2481 108 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
9211244 9211244 PRJNA1129273_P_NODE_2688_length_465_cov_1.966837_g2410_i0 PRJNA1129273 2688 465 1.966837 9.14579205 Mucorales 4827 Fungi Fungi 174 1.42e-50   NR OBZ89140.1 101091 g2410 i0 71.9 7.04516129032258 114 32 73.5 0 343 2 14 127 OBZ89140.1 Protein arginine N-methyltransferase 1 [Choanephora cucurbitarum] diamond 3276 174 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Choanephora Choanephora cucurbitarum
27006915 27006915 PRJNA1129273_P_NODE_7462_length_266_cov_1.450777_g7182_i0 PRJNA1129273 7462 266 1.450777 3.85906682 Calcarisporiella thermophila 911321 Fungi Fungi 103 5.33e-25   NR XP_069253582.1 911321 g7182 i0 64.4 0.981203007518797 87 30 98.1 1 4 264 129 214 XP_069253582.1 60S ribosomal protein eL6 [Calcarisporiella thermophila] diamond 261 103 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
28270276 28270276 PRJNA1129273_P_NODE_7466_length_266_cov_1.264249_g7186_i0 PRJNA1129273 7466 266 1.264249 3.36290234 Geosiphon pyriformis 50956 Fungi Fungi 95.1 9.24e-23   NR KAG9288311.1 50956 g7186 i0 64.3 7.45488721804511 84 30 94.7 0 3 254 15 98 KAG9288311.1 hypothetical protein G9A89_021342 [Geosiphon pyriformis] diamond 1983 95.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Archaeosporales Geosiphonaceae Geosiphon Geosiphon pyriformis
30512619 30512619 PRJNA1129273_P_NODE_10133_length_244_cov_0.900585_g9853_i0 PRJNA1129273 10133 244 0.900585 2.1974274 Rhizophagus irregularis DAOM 197198w 1432141 Fungi Fungi 42.4 0.0404   NR EXX50520.1 1432141 g9853 i0 32.4 0.909836065573771 74 42 81.1 1 226 29 75 148 EXX50520.1 hypothetical protein RirG_270120 [Rhizophagus irregularis DAOM 197198w] diamond 222 42.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
31164954 31164954 PRJNA1129273_P_NODE_6575_length_279_cov_1.485437_g6295_i0 PRJNA1129273 6575 279 1.485437 4.14436923 Mortierellaceae 4854 Fungi Fungi 91.7 3.33e-19   NR GJJ71224.1 205924 g6295 i0 48.4 2.91397849462366 91 46 96.8 1 277 8 393 483 GJJ71224.1 twinfilin [Entomortierella parvispora] diamond 813 91.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Entomortierella Entomortierella parvispora
31418216 31418216 PRJNA1129273_P_NODE_7076_length_271_cov_1.727273_g6796_i0 PRJNA1129273 7076 271 1.727273 4.68090983 Entrophospora 27375 Fungi Fungi 52.4 1.96e-5   NR CAG8523998.1 984092 g6796 i0 32.9 4.06273062730627 73 48 80.8 1 256 38 62 133 CAG8523998.1 15415_t:CDS:10 [Entrophospora candida] diamond 1101 52.8 0.992424242424242 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Entrophosporales Entrophosporaceae Entrophospora Entrophospora candida
31639544 31639544 PRJNA1129273_P_NODE_7256_length_268_cov_2.317949_g6976_i0 PRJNA1129273 7256 268 2.317949 6.21210332 Mucoromycota 1913637 Fungi Fungi 47.8 3.94e-4   NR KAG1247908.1 58291 g6976 i0 60.6 13.0746268656716 33 13 36.9 0 1 99 17 49 KAG1247908.1 hypothetical protein G6F68_014006 [Rhizopus microsporus] diamond 3504 48.1 0.993762993762994 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
31987544 31987544 PRJNA1129273_P_NODE_9918_length_245_cov_0.895349_g9638_i0 PRJNA1129273 9918 245 0.895349 2.19360505 Cunninghamellaceae 4851 Fungi Fungi 90.1 2.62e-20   NR SAM06261.1 4829 g9638 i0 55.7 2.90204081632653 79 35 96.7 0 239 3 110 188 SAM06261.1 hypothetical protein [Absidia glauca] diamond 711 90.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Absidia Absidia glauca
32019263 32019263 PRJNA1129273_P_NODE_10438_length_242_cov_2.710059_g10158_i0 PRJNA1129273 10438 242 2.710059 6.55834278 Fungi 4751 Fungi Fungi 55.5 1.2e-6   NR XP_052934121.1 64632 g10158 i0 45.3 2.49173553719008 64 35 79.3 0 38 229 339 402 XP_052934121.1 uncharacterized protein BDF20DRAFT_882488 [Mycotypha africana] diamond 603 55.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
32145872 32145872 PRJNA1129273_P_NODE_8938_length_250_cov_0.864407_g8658_i0 PRJNA1129273 8938 250 0.864407 2.1610175 Fungi 4751 Fungi Fungi 85.1 5.02e-17   NR GBB99701.1 94130 g8658 i0 44.2 4.788 77 43 92.4 0 13 243 270 346 GBB99701.1 hypothetical protein RclHR1_00360050 [Rhizophagus clarus] diamond 1197 85.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus clarus
32504997 32504997 PRJNA1129273_P_NODE_2919_length_439_cov_3.434426_g2640_i0 PRJNA1129273 2919 439 3.434426 15.07713014 Rhizophagus clarus 94130 Fungi Fungi 165 7.43e-49   NR GBC07495.1 94130 g2640 i0 60.9 19.6400911161731 128 50 87.5 0 55 438 33 160 GBC07495.1 hypothetical protein RclHR1_00750029 [Rhizophagus clarus] diamond 8622 165 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus clarus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;