RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1129273" and tax_kingdom = "Heunggongvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 3 ✖

bioproject 1

  • PRJNA1129273 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27323232 27323232 PRJNA1129273_P_NODE_6043_length_288_cov_1.413953_g5763_i0 PRJNA1129273 6043 288 1.413953 4.07218464 Microbacterium phage Pumpernickel 2885983 Viruses Viruses 50.1 4.84e-5   NR YP_010755093.1 2885983 g5763 i0 88 0.260416666666667 25 3 26 0 76 2 1 25 YP_010755093.1 hypothetical protein QEH42_gp062 [Microbacterium phage Pumpernickel] diamond 75 50.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Pumpernickelvirus Pumpernickelvirus pumpernickel
29123285 29123285 PRJNA1129273_P_NODE_9389_length_247_cov_1.787356_g9109_i0 PRJNA1129273 9389 247 1.787356 4.41476932 Arthrobacter phage 1191A 3053731 Viruses Viruses 97.4 5.83e-23   NR WJZ27838.1 3053731 g9109 i0 53.7 0.995951417004049 82 38 99.6 0 1 246 51 132 WJZ27838.1 DNA invertase [Arthrobacter phage 1191A] diamond 246 97.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Arthrobacter phage 1191A
31429113 31429113 PRJNA1129273_P_NODE_7096_length_271_cov_1.166667_g6816_i0 PRJNA1129273 7096 271 1.166667 3.16166757 Sphingomonas phage Scott 2282912 Viruses Viruses 160 7.61e-47   NR YP_009807879.1 2282912 g6816 i0 86.5 0.985239852398524 89 12 98.5 0 4 270 145 233 YP_009807879.1 DNA ligase [Sphingomonas phage Scott] diamond 267 160 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Autographivirales Autonotataviridae Scottvirus Scottvirus scott

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;