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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA1129273" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 11 ✖

bioproject 1

  • PRJNA1129273 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26817339 26817339 PRJNA1129273_P_NODE_3121_length_421_cov_6.459770_g2842_i0 PRJNA1129273 3121 421 6.45977 27.1956317 Pedinophyceae sp. YPF-7 765719 Plants Plants 98.2 2.4799999999999994e-23   NR CAG9460866.1 765719 g2842 i0 45.7 0.997624703087886 140 57 99.8 2 1 420 1 121 CAG9460866.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 420 98.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
27164976 27164976 PRJNA1129273_P_NODE_2562_length_478_cov_1.133333_g2286_i0 PRJNA1129273 2562 478 1.133333 5.41733174 Pedinophyceae sp. YPF-7 765719 Plants Plants 164 2.03e-45   NR CAG9467443.1 765719 g2286 i0 61.8 2.60460251046025 136 51 84.7 1 405 1 29 164 CAG9467443.1 unnamed protein product [Pedinophyceae sp. YPF-701] diamond 1245 164 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae       Pedinophyceae sp. YPF-701
28049454 28049454 PRJNA1129273_P_NODE_7165_length_269_cov_8.204082_g6885_i0 PRJNA1129273 7165 269 8.204082 22.06898058 Trebouxia sp. C 2796353 Plants Plants 53.5 2.57e-6   NR KAL3146794.1 3373144 g6885 i0 47.5 0.680297397769517 61 32 68 0 82 264 82 142 KAL3146794.1 hypothetical protein ABBQ38_014774 [Trebouxia sp. C0009 RCD-2024] diamond 183 53.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0009 RCD-2024
29407064 29407064 PRJNA1129273_P_NODE_10249_length_243_cov_1.758824_g9969_i0 PRJNA1129273 10249 243 1.758824 4.27394232 Prototheca wickerhamii 3111 Plants Plants 55.5 1.86e-7   NR KAK2076752.1 3111 g9969 i0 43.1 1.44444444444444 58 33 71.6 0 238 65 71 128 KAK2076752.1 hypothetical protein QBZ16_005512 [Prototheca wickerhamii] diamond 351 55.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
29901572 29901572 PRJNA1129273_P_NODE_10991_length_231_cov_2.943038_g10711_i0 PRJNA1129273 10991 231 2.943038 6.79841778 Eukaryota 2759 Plants Plants 88.2 3.12e-18   NR WIA21353.1 3088 g10711 i0 59.2 16.6233766233766 76 28 98.7 1 2 229 24 96 WIA21353.1 hypothetical protein OEZ85_000576 [Tetradesmus obliquus] diamond 3840 88.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
30481117 30481117 PRJNA1129273_P_NODE_9553_length_247_cov_0.879310_g9273_i0 PRJNA1129273 9553 247 0.87931 2.1718957 Coccomyxa subellipsoidea C-169 574566 Plants Plants 43.1 0.028   NR XP_005642590.1 574566 g9273 i0 35.9 0.777327935222672 64 40 77.7 1 208 17 178 240 XP_005642590.1 hypothetical protein COCSUDRAFT_45675 [Coccomyxa subellipsoidea C-169] diamond 192 43.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
30849272 30849272 PRJNA1129273_P_NODE_6914_length_274_cov_1.129353_g6634_i0 PRJNA1129273 6914 274 1.129353 3.09442722 Chlorophyceae 3166 Plants Plants 45.1 0.00844   NR KAF5842967.1 3046 g6634 i0 48.1 1.31386861313869 52 15 56.9 2 271 116 447 486 KAF5842967.1 NUC091 domain-containing protein [Dunaliella salina] diamond 360 45.4 0.993392070484582 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
30955227 30955227 PRJNA1129273_P_NODE_10694_length_241_cov_2.053571_g10414_i0 PRJNA1129273 10694 241 2.053571 4.94910611 Pleodorina starrii 330485 Plants Plants 121 6.48e-30   NR GLC34488.1 330485 g10414 i0 64.1 2.93775933609959 78 28 97.1 0 240 7 458 535 GLC34488.1 hypothetical protein PLESTM_000204200 [Pleodorina starrii] diamond 708 121 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Pleodorina Pleodorina starrii
31050102 31050102 PRJNA1129273_P_NODE_8375_length_253_cov_2.472222_g8095_i0 PRJNA1129273 8375 253 2.472222 6.25472166 Apatococcus lobatus 904363 Plants Plants 52.4 1.59e-5   NR KAK9818710.1 904363 g8095 i0 54 0.592885375494071 50 19 59.3 2 104 253 23 68 KAK9818710.1 hypothetical protein WJX74_000678 [Apatococcus lobatus] diamond 150 52.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Apatococcus Apatococcus lobatus
31618918 31618918 PRJNA1129273_P_NODE_4236_length_350_cov_0.841155_g3956_i0 PRJNA1129273 4236 350 0.841155 2.9440425 Chlorella desiccata (nom. nud.) 1650286 Plants Plants 149 4.06e-39   NR KAG7672042.1 1650286 g3956 i0 59.5 5.94 116 47 99.4 0 2 349 205 320 KAG7672042.1 hypothetical protein KSW81_004927 [Chlorella desiccata (nom. nud.)] diamond 2079 149 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris sp. 'desiccata'
31808738 31808738 PRJNA1129273_P_NODE_10337_length_243_cov_0.911765_g10057_i0 PRJNA1129273 10337 243 0.911765 2.21558895 Trebouxia sp. C 2796353 Plants Plants 132 7.67e-34   NR KAL3149191.1 3373145 g10057 i0 81.3 0.987654320987654 80 15 98.8 0 1 240 34 113 KAL3149191.1 hypothetical protein ABBQ32_002019 [Trebouxia sp. C0010 RCD-2024] diamond 240 132 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0010 RCD-2024

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;