RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA1129273" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA1129273 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27575865 27575865 PRJNA1129273_P_NODE_7304_length_268_cov_1.225641_g7024_i0 PRJNA1129273 7304 268 1.225641 3.28471788 Candidatus Fervidibacterota bacterium 2080304 Bacteria Bacteria 43.1 0.0361   NR MFA4030297.1 2080304 g7024 i0 38.8 0.548507462686567 49 30 54.9 0 200 54 540 588 MFA4030297.1 hypothetical protein [Candidatus Fervidibacterota bacterium] diamond 147 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota         Candidatus Fervidibacterota bacterium
28017987 28017987 PRJNA1129273_P_NODE_11265_length_217_cov_4.076389_g10985_i0 PRJNA1129273 11265 217 4.076389 8.84576413 Candidatus Saccharibacteria bacterium 49-2 1895829 Bacteria Bacteria 92.8 7.93e-22   NR OJU87427.1 1895829 g10985 i0 60.6 0.981566820276498 71 28 98.2 0 4 216 32 102 OJU87427.1 MAG: hypothetical protein BGO17_00245 [Candidatus Saccharibacteria bacterium 49-20] diamond 213 92.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20
28617937 28617937 PRJNA1129273_P_NODE_2147_length_541_cov_2.200855_g1871_i0 PRJNA1129273 2147 541 2.200855 11.90662555 Candidatus Dependentiae bacterium 2030827 Bacteria Bacteria 89.7 4.17e-18   NR RTL06913.1 2030827 g1871 i0 37.5 0.754158964879852 136 82 73.8 1 533 135 34 169 RTL06913.1 MAG: hypothetical protein EKK58_03715 [Candidatus Dependentiae bacterium] diamond 408 89.7 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
29648439 29648439 PRJNA1129273_P_NODE_3710_length_379_cov_1.450980_g3430_i0 PRJNA1129273 3710 379 1.45098 5.4992142 Candidatus Rifleibacterium 3389868 Bacteria Bacteria 74.3 1.52e-12   NR NLF97572.1 2053586 g3430 i0 27.8 3.82321899736148 126 90 98.9 1 3 377 373 498 NLF97572.1 hypothetical protein [Candidatus Rifleibacteriota bacterium] diamond 1449 74.3 1 Bacteria Bacteria candidate phyla   Candidatus Rifleibacteriota         Candidatus Rifleibacteriota bacterium
32568325 32568325 PRJNA1129273_P_NODE_5439_length_303_cov_1.856522_g5159_i0 PRJNA1129273 5439 303 1.856522 5.62526166 Patescibacteria group bacterium 2052139 Bacteria Bacteria 65.9 7.32e-11   NR MSR89371.1 2052139 g5159 i0 43.8 1.44554455445545 73 41 72.3 0 81 299 3 75 MSR89371.1 hypothetical protein [Patescibacteria group bacterium] diamond 438 65.9 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;