RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1126661" and tax_phylum = "Mollusca"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1126661 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20683582 20683582 PRJNA1126661_P_NODE_15157_length_326_cov_5.015810_g14628_i0 PRJNA1126661 15157 326 5.01581 16.3515406 Metazoa 33208 Mollusca Mollusca 79 1.63e-14   NR XP_021346337.1 6573 g14628 i0 68 5.00613496932515 50 16 46 0 1 150 193 242 XP_021346337.1 nucleoredoxin-like [Mizuhopecten yessoensis] diamond 1632 79.7 0.991217063989962 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Mizuhopecten Mizuhopecten yessoensis
26912041 26912041 PRJNA1126661_P_NODE_73162_length_245_cov_4.447674_g72632_i0 PRJNA1126661 73162 245 4.447674 10.8968013 Bulinus truncatus 55810 Mollusca Mollusca 95.1 1.43e-20   NR KAH9493041.1 55810 g72632 i0 56.1 1.9469387755102 82 35 99.2 1 244 2 807 888 KAH9493041.1 Multidrug resistance-associated protein 7 [Bulinus truncatus] diamond 477 95.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Bulinus Bulinus truncatus
29028546 29028546 PRJNA1126661_P_NODE_62708_length_271_cov_5.328283_g62178_i0 PRJNA1126661 62708 271 5.328283 14.43964693 Candidula unifasciata 100452 Mollusca Mollusca 43.1 0.0354   NR CAG5117139.1 100452 g62178 i0 57.5 0.44280442804428 40 17 44.3 0 269 150 297 336 CAG5117139.1 unnamed protein product, partial [Candidula unifasciata] diamond 120 43.1 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Geomitridae Candidula Candidula unifasciata
31492578 31492578 PRJNA1126661_P_NODE_20856_length_326_cov_3.778656_g20327_i0 PRJNA1126661 20856 326 3.778656 12.31841856 Littorina saxatilis 31220 Mollusca Mollusca 119 1.29e-28   NR KAK7094328.1 31220 g20327 i0 52.8 2.98159509202454 108 48 99.4 1 3 326 18 122 KAK7094328.1 hypothetical protein V1264_007968 [Littorina saxatilis] diamond 972 119 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;