RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1126661" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1126661 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27449704 27449704 PRJNA1126661_P_NODE_39383_length_301_cov_3.653509_g38854_i0 PRJNA1126661 39383 301 3.653509 10.99706209 Ridgeia piscesae 27915 Annelida Annelida 68.9 4.32e-11   NR KAK2189433.1 27915 g38854 i0 64.6 1.43521594684385 48 17 47.8 0 296 153 254 301 KAK2189433.1 hypothetical protein NP493_106g00021 [Ridgeia piscesae] diamond 432 68.9 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
30849268 30849268 PRJNA1126661_P_NODE_34274_length_301_cov_7.407895_g33745_i0 PRJNA1126661 34274 301 7.407895 22.29776395 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 72 2.96e-12   NR CAH1788905.1 6347 g33745 i0 86.1 2.2624584717608 36 5 35.9 0 45 152 208 243 CAH1788905.1 unnamed protein product [Owenia fusiformis] diamond 681 72.4 0.994475138121547 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;