RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1126661" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA1126661 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28933567 28933567 PRJNA1126661_P_NODE_41188_length_301_cov_3.061404_g40659_i0 PRJNA1126661 41188 301 3.061404 9.21482604 Yasminevirus sp. GU-2 3060817 Viruses Viruses 87.8 1.05e-17   NR VBB18867.1 2420051 g40659 i0 80 0.498338870431894 50 10 49.8 0 299 150 31 80 VBB18867.1 DEXDc helicase [Yasminevirus sp. GU-2018] diamond 150 87.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Yasminevirus Yasminevirus saudimassiliense
30860224 30860224 PRJNA1126661_P_NODE_66714_length_261_cov_7.234043_g66184_i0 PRJNA1126661 66714 261 7.234043 18.88085223 Terrestrivirus sp. 2487775 Viruses Viruses 42.7 0.0433   NR AYV75160.1 2487775 g66184 i0 46 0.574712643678161 50 26 56.3 1 6 152 290 339 AYV75160.1 MAG: hypothetical protein Terrestrivirus1_34 [Terrestrivirus sp.] diamond 150 42.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Terrestrivirus sp.
31492584 31492584 PRJNA1126661_P_NODE_35696_length_301_cov_5.675439_g35167_i0 PRJNA1126661 35696 301 5.675439 17.08307139 Invertebrate iridovirus 25 1301280 Viruses Viruses 89.4 9.73e-20   NR YP_009010692.1 1301280 g35167 i0 83.7 1.46511627906977 49 8 48.8 0 154 300 29 77 YP_009010692.1 Thymidine kinase [Invertebrate iridovirus 25] diamond 441 89.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae Chloriridovirus Chloriridovirus simulium2

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;