RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA1123686" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1123686 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26785610 26785610 PRJNA1123686_S_NODE_801_length_350_cov_104.775701_g769_i0 PRJNA1123686 801 350 104.775701 366.7149535 Stylophora pistillata 50429 Cnidaria other_Eukaryota 58.2 5.24e-7   NR PFX25264.1 50429 g769 i0 54.4 0.488571428571429 57 26 48.9 0 180 350 697 753 PFX25264.1 Leucine-rich repeat and calponin-likey domain-containing protein 1 [Stylophora pistillata] diamond 171 58.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
26838059 26838059 PRJNA1123686_S_NODE_9601_length_191_cov_10.796296_g9569_i0 PRJNA1123686 9601 191 10.796296 20.62092536 Metazoa 33208 Cnidaria other_Eukaryota 42 0.0345   NR XP_047138851.1 6087 g9569 i0 77.3 45.9581151832461 22 5 34.6 0 19 84 318 339 XP_047138851.1 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 isoform X1 [Hydra vulgaris] diamond 8778 42.4 0.990566037735849 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
27723226 27723226 PRJNA1123686_S_NODE_544_length_376_cov_95.429395_g513_i0 PRJNA1123686 544 376 95.429395 358.8145252 Metazoa 33208 Cnidaria other_Eukaryota 47 0.00448   NR XP_057315388.1 13093 g513 i0 54.9 1.47606382978723 51 23 40.7 0 3 155 225 275 XP_057315388.1 uncharacterized protein LOC130656529 isoform X1 [Hydractinia symbiolongicarpus] diamond 555 47.4 0.991561181434599 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
30355124 30355124 PRJNA1123686_S_NODE_812_length_349_cov_91.693750_g780_i0 PRJNA1123686 812 349 91.69375 320.0111875 Stylophora pistillata 50429 Cnidaria other_Eukaryota 59.7 1.51e-7   NR PFX25264.1 50429 g780 i0 52.5 0.524355300859599 61 29 52.4 0 167 349 693 753 PFX25264.1 Leucine-rich repeat and calponin-likey domain-containing protein 1 [Stylophora pistillata] diamond 183 59.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
30418170 30418170 PRJNA1123686_S_NODE_17393_length_160_cov_31.908397_g17361_i0 PRJNA1123686 17393 160 31.908397 51.0534352 Hydra vulgaris 6087 Cnidaria other_Eukaryota 45.8 6.51e-4   NR XP_065669564.1 6087 g17361 i0 71.9 1.9125 32 9 60 0 21 116 111 142 XP_065669564.1 small ribosomal subunit protein eS7 [Hydra vulgaris] diamond 306 45.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
30860155 30860155 PRJNA1123686_S_NODE_854_length_345_cov_117.471519_g822_i0 PRJNA1123686 854 345 117.471519 405.27674055 Stylophora pistillata 50429 Cnidaria other_Eukaryota 58.2 5.06e-7   NR PFX25264.1 50429 g822 i0 54.4 0.495652173913044 57 26 49.6 0 171 1 697 753 PFX25264.1 Leucine-rich repeat and calponin-likey domain-containing protein 1 [Stylophora pistillata] diamond 171 58.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
31228279 31228279 PRJNA1123686_S_NODE_18215_length_158_cov_11.558140_g18183_i0 PRJNA1123686 18215 158 11.55814 18.2618612 Metazoa 33208 Cnidaria other_Eukaryota 47.8 9e-5   NR XP_027047631.1 46731 g18183 i0 63.9 13.6139240506329 36 13 68.4 0 3 110 102 137 XP_027047631.1 nuclear cap-binding protein subunit 2-like [Pocillopora damicornis] diamond 2151 48.1 0.993762993762994 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis
31671225 31671225 PRJNA1123686_S_NODE_617_length_369_cov_175.202941_g586_i0 PRJNA1123686 617 369 175.202941 646.49885229 Metazoa 33208 Cnidaria other_Eukaryota 51.2 1.39e-4   NR XP_057315388.1 13093 g586 i0 43 8.28455284552846 93 53 75.6 0 3 281 225 317 XP_057315388.1 uncharacterized protein LOC130656529 isoform X1 [Hydractinia symbiolongicarpus] diamond 3057 51.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
32367487 32367487 PRJNA1123686_S_NODE_719_length_358_cov_56.930091_g688_i0 PRJNA1123686 719 358 56.930091 203.80972578 Metazoa 33208 Cnidaria other_Eukaryota 62 3.32e-9   NR XP_015766454.1 70779 g688 i0 55.2 6.56145251396648 87 39 72.9 0 3 263 64 150 XP_015766454.1 PREDICTED: ubiquitin-60S ribosomal protein L40 [Acropora digitifera] diamond 2349 62 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora digitifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;