RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1123436" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1123436 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30407305 30407305 PRJNA1123436_P_NODE_24913_length_522_cov_1.525612_g23706_i0 PRJNA1123436 24913 522 1.525612 7.96369464 Viruses 10239 Viruses Viruses 107 3.11e-23   NR AVM87441.1 2116205 g23706 i0 36.8 2.11494252873563 185 101 99.4 4 520 2 1020 1200 AVM87441.1 polyprotein [Wenling rattails picornavirus] diamond 1104 108 0.990740740740741 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Wenling rattails picornavirus
32093327 32093327 PRJNA1123436_P_NODE_112938_length_245_cov_2.156977_g111724_i0 PRJNA1123436 112938 245 2.156977 5.28459365 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 70.5 6.64e-12   NR AVM87418.1 3063761 g111724 i0 62 1.17551020408163 50 16 58.8 2 146 3 779 827 AVM87418.1 polyprotein [Yancheng osbecks grenadier anchovy picornavirus] diamond 288 70.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;