RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1123436" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1123436 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30449605 30449605 PRJNA1123436_P_NODE_60753_length_320_cov_2.186235_g59539_i0 PRJNA1123436 60753 320 2.186235 6.995952 Mycoplasmatales bacterium 2023991 Bacteria Bacteria 68.9 5.75e-11   NR HXN54441.1 2023991 g59539 i0 62.5 0.45 48 18 45 0 1 144 251 298 HXN54441.1 reverse transcriptase family protein [Mycoplasmatales bacterium] diamond 144 68.9 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales     Mycoplasmatales bacterium
31270985 31270985 PRJNA1123436_P_NODE_79015_length_280_cov_1.115942_g77801_i0 PRJNA1123436 79015 280 1.115942 3.1246376 Mycoplasma sp. CAG:611_25_7 1897009 Bacteria Bacteria 196 1.35e-61   NR OLA94045.1 1897009 g77801 i0 100 1.99285714285714 93 0 99.6 0 279 1 36 128 OLA94045.1 MAG: hypothetical protein BHW63_00550, partial [Mycoplasma sp. CAG:611_25_7] diamond 558 196 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma sp. CAG:611_25_7

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;