RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1123436" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1123436 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4106071 4106071 PRJNA1123436_P_NODE_116544_length_244_cov_0.900585_g115330_i0 PRJNA1123436 116544 244 0.900585 2.1974274 Heterostelium album PN5 2086695 Evosea other_Eukaryota 138 2.09e-37   NR XP_020436317.1 670386 g115330 i0 80.2 3.97131147540984 81 16 99.6 0 1 243 291 371 XP_020436317.1 zinc-containing alcohol dehydrogenase [Heterostelium album PN500] diamond 969 138 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
28333496 28333496 PRJNA1123436_P_NODE_128706_length_229_cov_2.166667_g127492_i0 PRJNA1123436 128706 229 2.166667 4.96166743 Polysphondylium violaceum 133409 Evosea other_Eukaryota 77.4 1.93e-14   NR KAF2071788.1 133409 g127492 i0 48.1 1.00873362445415 77 36 96.9 3 223 2 408 483 KAF2071788.1 hypothetical protein CYY_006895 [Polysphondylium violaceum] diamond 231 77.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
30196469 30196469 PRJNA1123436_P_NODE_99552_length_250_cov_0.870056_g98338_i0 PRJNA1123436 99552 250 0.870056 2.17514 Entamoeba invadens 33085 Evosea other_Eukaryota 82.8 3.17e-16   NR BAN41639.1 33085 g98338 i0 50.6 0.948 79 37 92.4 2 7 237 367 445 BAN41639.1 actin binding protein, putative [Entamoeba invadens] diamond 237 82.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;