RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1123436" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1123436 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28270200 28270200 PRJNA1123436_P_NODE_85086_length_268_cov_2.184615_g83872_i0 PRJNA1123436 85086 268 2.184615 5.8547682 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 89.4 1.27e-19   NR MCC6980888.1 2052166 g83872 i0 80.7 0.638059701492537 57 11 63.8 0 39 209 72 128 MCC6980888.1 class I SAM-dependent methyltransferase [Candidatus Melainabacteria bacterium] diamond 171 89.4 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
29091465 29091465 PRJNA1123436_P_NODE_99868_length_250_cov_0.870056_g98654_i0 PRJNA1123436 99868 250 0.870056 2.17514 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 48.9 2.77e-4   NR HEY9817627.1 2364082 g98654 i0 45.3 2.04 53 29 63.6 0 92 250 142 194 HEY9817627.1 ATP-dependent helicase [Candidatus Obscuribacterales bacterium] diamond 510 48.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
29375427 29375427 PRJNA1123436_P_NODE_114509_length_245_cov_0.895349_g113295_i0 PRJNA1123436 114509 245 0.895349 2.19360505 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 139 1.59e-36   NR HEY9869772.1 2364082 g113295 i0 84 1.98367346938776 81 13 99.2 0 2 244 235 315 HEY9869772.1 AarF/ABC1/UbiB kinase family protein [Candidatus Obscuribacterales bacterium] diamond 486 139 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
30090811 30090811 PRJNA1123436_P_NODE_95632_length_251_cov_0.865169_g94418_i0 PRJNA1123436 95632 251 0.865169 2.17157419 Bacillati 1783272 Bacteria Bacteria 99 6.21e-22   NR PWU01258.1 2052166 g94418 i0 59 7.51792828685259 83 30 99.2 1 2 250 396 474 PWU01258.1 MAG: hypothetical protein C5B53_03075 [Candidatus Melainabacteria bacterium] diamond 1887 99 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;