RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1123436" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1123436 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10484354 10484354 PRJNA1123436_P_NODE_99669_length_250_cov_0.870056_g98455_i0 PRJNA1123436 99669 250 0.870056 2.17514 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 169 2.23e-50   NR MCI0452644.1 2053570 g98455 i0 92.8 2.988 83 6 99.6 0 249 1 169 251 MCI0452644.1 FAD-binding protein [Candidatus Latescibacterota bacterium] diamond 747 169 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
26785579 26785579 PRJNA1123436_P_NODE_126241_length_241_cov_0.916667_g125027_i0 PRJNA1123436 126241 241 0.916667 2.20916747 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 129 7.140000000000001e-33   NR MDO9694605.1 2053570 g125027 i0 72.5 3.98340248962656 80 22 99.6 0 1 240 475 554 MDO9694605.1 DUF2075 domain-containing protein [Candidatus Latescibacterota bacterium] diamond 960 129 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29912465 29912465 PRJNA1123436_P_NODE_125871_length_241_cov_0.916667_g124657_i0 PRJNA1123436 125871 241 0.916667 2.20916747 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 117 1.4e-28   NR MSR83289.1 2053570 g124657 i0 87.3 1.85477178423237 79 10 98.3 0 3 239 454 532 MSR83289.1 chromosome segregation protein SMC [Candidatus Latescibacterota bacterium] diamond 447 117 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
31429012 31429012 PRJNA1123436_P_NODE_120296_length_243_cov_0.905882_g119082_i0 PRJNA1123436 120296 243 0.905882 2.20129326 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 128 2.43e-32   NR UCE03556.1 2053570 g119082 i0 83.5 0.975308641975309 79 13 97.5 0 3 239 424 502 UCE03556.1 MAG: efflux RND transporter permease subunit [Candidatus Latescibacterota bacterium] diamond 237 128 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;