contig_metadata
4 rows where analysis = "diamond", bioproject = "PRJNA1123436" and tax_clade = "Amoebozoa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4106071 | 4106071 | PRJNA1123436_P_NODE_116544_length_244_cov_0.900585_g115330_i0 | PRJNA1123436 | 116544 | 244 | 0.900585 | 2.1974274 | Heterostelium album PN5 | 2086695 | Evosea | other_Eukaryota | 138 | 2.09e-37 | NR | XP_020436317.1 | 670386 | g115330 | i0 | 80.2 | 3.97131147540984 | 81 | 16 | 99.6 | 0 | 1 | 243 | 291 | 371 | XP_020436317.1 zinc-containing alcohol dehydrogenase [Heterostelium album PN500] | diamond | 969 | 138 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Acytosteliales | Acytosteliaceae | Heterostelium | Heterostelium album | ||
| 27418151 | 27418151 | PRJNA1123436_P_NODE_92203_length_255_cov_1.637363_g90989_i0 | PRJNA1123436 | 92203 | 255 | 1.637363 | 4.17527565 | Acanthamoeba castellanii str. Neff | 1257118 | Discosea | other_Eukaryota | 145 | 4.55e-38 | NR | XP_004340905.1 | 1257118 | g90989 | i0 | 83.3 | 0.988235294117647 | 84 | 14 | 98.8 | 0 | 2 | 253 | 1185 | 1268 | XP_004340905.1 clathrin heavy chain, putative [Acanthamoeba castellanii str. Neff] | diamond | 252 | 145 | 1 | Eukaryota | Amoebozoa | Discosea | Longamoebia | Acanthamoebidae | Acanthamoeba | Acanthamoeba castellanii | |||
| 28333496 | 28333496 | PRJNA1123436_P_NODE_128706_length_229_cov_2.166667_g127492_i0 | PRJNA1123436 | 128706 | 229 | 2.166667 | 4.96166743 | Polysphondylium violaceum | 133409 | Evosea | other_Eukaryota | 77.4 | 1.93e-14 | NR | KAF2071788.1 | 133409 | g127492 | i0 | 48.1 | 1.00873362445415 | 77 | 36 | 96.9 | 3 | 223 | 2 | 408 | 483 | KAF2071788.1 hypothetical protein CYY_006895 [Polysphondylium violaceum] | diamond | 231 | 77.4 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Polysphondylium | Polysphondylium violaceum | ||
| 30196469 | 30196469 | PRJNA1123436_P_NODE_99552_length_250_cov_0.870056_g98338_i0 | PRJNA1123436 | 99552 | 250 | 0.870056 | 2.17514 | Entamoeba invadens | 33085 | Evosea | other_Eukaryota | 82.8 | 3.17e-16 | NR | BAN41639.1 | 33085 | g98338 | i0 | 50.6 | 0.948 | 79 | 37 | 92.4 | 2 | 7 | 237 | 367 | 445 | BAN41639.1 actin binding protein, putative [Entamoeba invadens] | diamond | 237 | 82.8 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Entamoeba | Entamoeba invadens |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;