RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA1123309" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1123309 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15581276 15581276 PRJNA1123309_P_NODE_47573_length_253_cov_0.866667_g47193_i0 PRJNA1123309 47573 253 0.866667 2.19266751 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 96.7 2.14e-21   NR MCW3101274.1 2739509 g47193 i0 46.8 0.91304347826087 77 41 91.3 0 16 246 291 367 MCW3101274.1 transposase-like [Chthonomonadaceae bacterium] diamond 231 96.7 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
27891318 27891318 PRJNA1123309_P_NODE_52845_length_250_cov_0.881356_g52465_i0 PRJNA1123309 52845 250 0.881356 2.20339 Chthonomonadales bacterium 2282151 Bacteria Bacteria 112 1.98e-29   NR HXG23971.1 2282151 g52465 i0 71.4 0.924 77 22 92.4 0 240 10 12 88 HXG23971.1 secondary thiamine-phosphate synthase enzyme YjbQ [Chthonomonadales bacterium] diamond 231 112 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
28301872 28301872 PRJNA1123309_P_NODE_46446_length_254_cov_1.353591_g46066_i0 PRJNA1123309 46446 254 1.353591 3.43812114 Armatimonadota bacterium 2033014 Bacteria Bacteria 61.2 1.23e-8   NR HJN17197.1 2033014 g46066 i0 52.4 0.74409448818897606 63 26 73.2 2 225 40 282 341 HJN17197.1 hypothetical protein [Armatimonadota bacterium] diamond 189 61.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28523052 28523052 PRJNA1123309_P_NODE_58487_length_246_cov_1.618497_g58107_i0 PRJNA1123309 58487 246 1.618497 3.98150262 Armatimonadota bacterium 2033014 Bacteria Bacteria 42.7 0.0366   NR MEN3001747.1 2033014 g58107 i0 40.9 0.536585365853659 44 26 53.7 0 151 20 4 47 MEN3001747.1 tetratricopeptide repeat protein [Armatimonadota bacterium] diamond 132 42.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30407291 30407291 PRJNA1123309_P_NODE_64693_length_243_cov_0.917647_g64313_i0 PRJNA1123309 64693 243 0.917647 2.22988221 Armatimonadota 67819 Bacteria Bacteria 129 9.11e-33   NR WP_395095279.1 1872638 g64313 i0 71.3 4.9382716049382704 80 23 98.8 0 241 2 186 265 WP_395095279.1 DUF1592 domain-containing protein [Armatimonas sp.] diamond 1200 130 0.992307692307692 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
30449549 30449549 PRJNA1123309_P_NODE_39433_length_272_cov_1.306533_g39053_i0 PRJNA1123309 39433 272 1.306533 3.5537697600000002 Fimbriimonas sp. 1936159 Bacteria Bacteria 118 1.83e-30   NR HWD40383.1 1936159 g39053 i0 63.2 0.959558823529412 87 32 96 0 10 270 88 174 HWD40383.1 ParB/RepB/Spo0J family partition protein [Fimbriimonas sp.] diamond 261 118 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
31018124 31018124 PRJNA1123309_P_NODE_66515_length_242_cov_0.923077_g66135_i0 PRJNA1123309 66515 242 0.923077 2.23384634 Armatimonadota bacterium 2033014 Bacteria Bacteria 103 1.4500000000000002e-26   NR HUV04219.1 2033014 g66135 i0 61.5 1.93388429752066 78 30 96.7 0 235 2 3 80 HUV04219.1 polyhydroxyalkanoate synthesis regulator [Armatimonadota bacterium] diamond 468 103 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31808592 31808592 PRJNA1123309_P_NODE_30757_length_294_cov_1.226244_g30377_i0 PRJNA1123309 30757 294 1.226244 3.60515736 Armatimonadota bacterium 2033014 Bacteria Bacteria 57.4 4.74e-7   NR MBN9503455.1 2033014 g30377 i0 57.4 0.908163265306122 47 20 48 0 285 145 14 60 MBN9503455.1 tetratricopeptide repeat protein [Armatimonadota bacterium] diamond 267 57.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;