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contig_metadata

33 rows where analysis = "diamond", bioproject = "PRJNA1123309" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 33 ✖

bioproject 1

  • PRJNA1123309 · 33 ✖

analysis 1

  • diamond · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10481878 10481878 PRJNA1123309_P_NODE_32869_length_288_cov_1.381395_g32489_i0 PRJNA1123309 32869 288 1.381395 3.9784176 Candidatus Sumerlaeaceae bacterium 2315423 Bacteria Bacteria 135 4.55e-35   NR MBX7245183.1 2315423 g32489 i0 64.2 2.96875 95 34 99 0 2 286 347 441 MBX7245183.1 FAD-dependent thymidylate synthase [Candidatus Sumerlaeaceae bacterium] diamond 855 135 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae   Candidatus Sumerlaeaceae bacterium
20679794 20679794 PRJNA1123309_P_NODE_39437_length_272_cov_1.296482_g39057_i0 PRJNA1123309 39437 272 1.296482 3.52643104 Bacteria 2 Bacteria Bacteria 185 4.42e-57   NR OJU87738.1 1895829 g39057 i0 95.6 5.95588235294118 90 4 99.3 0 1 270 82 171 OJU87738.1 MAG: deoxycytidine triphosphate deaminase [Candidatus Saccharibacteria bacterium 49-20] diamond 1620 186 0.99462365591397806 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 49-20
21955034 21955034 PRJNA1123309_P_NODE_3058_length_802_cov_1.743484_g2761_i0 PRJNA1123309 3058 802 1.743484 13.98274168 Patescibacteria group bacterium 2052139 Bacteria Bacteria 447 7.72e-155   NR MCL4419852.1 2052139 g2761 i0 81.1 0.991271820448878 265 50 99.1 0 6 800 8 272 MCL4419852.1 CoA-acylating methylmalonate-semialdehyde dehydrogenase [Patescibacteria group bacterium] diamond 795 447 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
26679326 26679326 PRJNA1123309_P_NODE_16801_length_380_cov_0.983713_g16422_i0 PRJNA1123309 16801 380 0.983713 3.7381094 Bacteria 2 Bacteria Bacteria 141 6.659999999999999e-37   NR MEK7608759.1 2052139 g16422 i0 61.4 7.08157894736842 114 42 90 1 12 353 373 484 MEK7608759.1 ABC-F family ATP-binding cassette domain-containing protein [Patescibacteria group bacterium] diamond 2691 142 0.992957746478873 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
26785551 26785551 PRJNA1123309_P_NODE_38961_length_273_cov_1.490000_g38581_i0 PRJNA1123309 38961 273 1.49 4.0677 Patescibacteria group bacterium 2052139 Bacteria Bacteria 82 8.1e-16   NR MCL4419262.1 2052139 g38581 i0 54.8 0.802197802197802 73 27 80.2 2 260 42 83 149 MCL4419262.1 hypothetical protein [Patescibacteria group bacterium] diamond 219 82 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
26785559 26785559 PRJNA1123309_P_NODE_64141_length_243_cov_0.917647_g63761_i0 PRJNA1123309 64141 243 0.917647 2.22988221 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 89 1.67e-19   NR HET8690147.1 2973664 g63761 i0 55.4 0.91358024691358 74 32 90.1 1 24 242 1 74 HET8690147.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 222 89 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
27101738 27101738 PRJNA1123309_P_NODE_66882_length_242_cov_0.911243_g66502_i0 PRJNA1123309 66882 242 0.911243 2.20520806 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 68.9 1.39e-11   NR MCG5105437.1 2026720 g66502 i0 49.1 0.65702479338843 53 27 65.7 0 82 240 1 53 MCG5105437.1 metallophosphoesterase [Candidatus Saccharibacteria bacterium] diamond 159 68.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27607440 27607440 PRJNA1123309_P_NODE_66324_length_242_cov_0.923077_g65944_i0 PRJNA1123309 66324 242 0.923077 2.23384634 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 152 6.09e-41   NR MCA9345116.1 2026720 g65944 i0 88.5 6.71900826446281 78 9 96.7 0 240 7 542 619 MCA9345116.1 phosphoenolpyruvate synthase [Candidatus Saccharibacteria bacterium] diamond 1626 152 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27765376 27765376 PRJNA1123309_P_NODE_64944_length_243_cov_0.917647_g64564_i0 PRJNA1123309 64944 243 0.917647 2.22988221 Candidatus Wolfebacteria bacterium 2030812 Bacteria Bacteria 82.4 1.93e-18   NR PCI28436.1 2030812 g64564 i0 55.6 0.888888888888889 72 32 88.9 0 218 3 1 72 PCI28436.1 MAG: hypothetical protein COB55_03885 [Candidatus Wolfebacteria bacterium] diamond 216 82.4 1 Bacteria Bacteria candidate phyla   Candidatus Wolfeibacteriota         Candidatus Wolfebacteria bacterium
28112358 28112358 PRJNA1123309_P_NODE_51885_length_250_cov_1.316384_g51505_i0 PRJNA1123309 51885 250 1.316384 3.29096 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 48.1 3.36e-4   NR HET8671483.1 2973664 g51505 i0 50.9 0.66 55 26 64.8 1 166 5 95 149 HET8671483.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 165 48.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
28270141 28270141 PRJNA1123309_P_NODE_47786_length_253_cov_0.866667_g47406_i0 PRJNA1123309 47786 253 0.866667 2.19266751 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 129 7.17e-33   NR HEX4988698.1 2838779 g47406 i0 96.9 1.54150197628458 65 2 77.1 0 51 245 1 65 HEX4988698.1 AAA family ATPase [Candidatus Binatia bacterium] diamond 390 129 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28459975 28459975 PRJNA1123309_P_NODE_63226_length_244_cov_0.912281_g62846_i0 PRJNA1123309 63226 244 0.912281 2.22596564 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 134 2.74e-38   NR MDO4780871.1 2026720 g62846 i0 89.2 0.909836065573771 74 8 91 0 22 243 1 74 MDO4780871.1 30S ribosomal protein S9 [Candidatus Saccharibacteria bacterium] diamond 222 134 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28523053 28523053 PRJNA1123309_P_NODE_66647_length_242_cov_0.923077_g66267_i0 PRJNA1123309 66647 242 0.923077 2.23384634 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 51.6 2.68e-5   NR AXA35498.1 2250252 g66267 i0 62.2 0.557851239669422 45 16 54.5 1 134 3 174 218 AXA35498.1 N-acetylmuramoyl-L-alanine amidase [Candidatus Sumerlaea chitinivorans] diamond 135 51.6 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
28554686 28554686 PRJNA1123309_P_NODE_47487_length_253_cov_0.866667_g47107_i0 PRJNA1123309 47487 253 0.866667 2.19266751 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 62 6.79e-9   NR MCG5105720.1 2026720 g47107 i0 50.9 0.652173913043478 55 27 65.2 0 2 166 155 209 MCG5105720.1 phage tail tip lysozyme [Candidatus Saccharibacteria bacterium] diamond 165 62 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28575228 28575228 PRJNA1123309_P_NODE_60627_length_245_cov_0.906977_g60247_i0 PRJNA1123309 60627 245 0.906977 2.22209365 Acidobacteriota 57723 Bacteria Bacteria 154 2.09e-42   NR HYV85415.1 2052139 g60247 i0 89.6 9.58775510204082 77 8 94.3 0 245 15 135 211 HYV85415.1 hypothetical protein [Patescibacteria group bacterium] diamond 2349 154 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28680966 28680966 PRJNA1123309_P_NODE_38427_length_274_cov_2.303483_g38047_i0 PRJNA1123309 38427 274 2.303483 6.31154342 Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_1 2099671 Bacteria Bacteria 62 9.08e-9   NR OGG44698.1 1817868 g38047 i0 44.6 1.66423357664234 83 45 89.8 1 9 254 812 894 OGG44698.1 MAG: hypothetical protein A3F84_28760 [Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10] diamond 456 62 1 Bacteria Bacteria candidate phyla   Candidatus Handelsmaniibacteriota         Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10
28827699 28827699 PRJNA1123309_P_NODE_26648_length_313_cov_0.958333_g26268_i0 PRJNA1123309 26648 313 0.958333 2.99958229 Bacteria 2 Bacteria Bacteria 184 1.42e-54   NR MFI5326198.1 2053607 g26268 i0 86.1 3.83386581469649 101 14 96.8 0 10 312 184 284 MFI5326198.1 ISNCY family transposase [Candidatus Rokuibacteriota bacterium] diamond 1200 185 0.994594594594595 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
28870178 28870178 PRJNA1123309_P_NODE_47308_length_253_cov_0.866667_g46928_i0 PRJNA1123309 47308 253 0.866667 2.19266751 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 90.9 2.81e-20   NR HEX4987397.1 2838779 g46928 i0 100 1.03162055335968 43 0 51 0 117 245 17 59 HEX4987397.1 ABC transporter substrate-binding protein [Candidatus Binatia bacterium] diamond 261 90.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28870186 28870186 PRJNA1123309_P_NODE_64388_length_243_cov_0.917647_g64008_i0 PRJNA1123309 64388 243 0.917647 2.22988221 Patescibacteria group bacterium 2052139 Bacteria Bacteria 135 2.03e-35   NR MCL4419561.1 2052139 g64008 i0 80.8 2.88888888888889 78 15 96.3 0 236 3 61 138 MCL4419561.1 dynein heavy chain domain-containing protein [Patescibacteria group bacterium] diamond 702 135 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29028431 29028431 PRJNA1123309_P_NODE_66608_length_242_cov_0.923077_g66228_i0 PRJNA1123309 66608 242 0.923077 2.23384634 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 42.4 0.0292   NR HEV8481238.1 2212470 g66228 i0 56.3 0.396694214876033 32 14 39.7 0 131 36 120 151 HEV8481238.1 DUF177 domain-containing protein [Candidatus Eiseniibacteriota bacterium] diamond 96 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
29280558 29280558 PRJNA1123309_P_NODE_52709_length_250_cov_0.881356_g52329_i0 PRJNA1123309 52709 250 0.881356 2.20339 Candidatus Nanosynbacter sp. 2725945 Bacteria Bacteria 166 3.47e-49   NR MBF1032545.1 2725945 g52329 i0 94 0.996 83 5 99.6 0 249 1 5 87 MBF1032545.1 prepilin peptidase [Candidatus Nanosynbacter sp.] diamond 249 166 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp.
29564817 29564817 PRJNA1123309_P_NODE_56170_length_248_cov_0.891429_g55790_i0 PRJNA1123309 56170 248 0.891429 2.21074392 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 156 1.2999999999999996e-43   NR MBB1567568.1 2026720 g55790 i0 93.8 0.967741935483871 80 5 96.8 0 241 2 357 436 MBB1567568.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [Candidatus Saccharibacteria bacterium] diamond 240 156 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30038603 30038603 PRJNA1123309_P_NODE_49231_length_252_cov_0.871508_g48851_i0 PRJNA1123309 49231 252 0.871508 2.19620016 Minisyncoccota bacterium 2053589 Bacteria Bacteria 110 3.39e-28   NR HUQ30000.1 2053589 g48851 i0 67.1 0.94047619047619 79 26 94 0 14 250 18 96 HUQ30000.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 237 110 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30217277 30217277 PRJNA1123309_P_NODE_36432_length_279_cov_1.514563_g36052_i0 PRJNA1123309 36432 279 1.514563 4.22563077 Bacillati 1783272 Bacteria Bacteria 60.8 2.25e-8   NR MDR3549629.1 2053589 g36052 i0 42.2 1.82795698924731 83 41 81.7 2 30 257 194 276 MDR3549629.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 510 60.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30418121 30418121 PRJNA1123309_P_NODE_50253_length_251_cov_0.876404_g49873_i0 PRJNA1123309 50253 251 0.876404 2.19977404 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 78.6 1.35e-16   NR MFM2383442.1 2762014 g49873 i0 58.2 0.657370517928287 55 23 65.7 0 166 2 8 62 MFM2383442.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 165 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30923505 30923505 PRJNA1123309_P_NODE_57394_length_247_cov_0.896552_g57014_i0 PRJNA1123309 57394 247 0.896552 2.21448344 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 55.1 6.19e-7   NR MCK9370988.1 2099670 g57014 i0 41.9 0.753036437246964 62 35 74.1 1 216 34 116 177 MCK9370988.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 186 55.1 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
31018122 31018122 PRJNA1123309_P_NODE_64735_length_243_cov_0.917647_g64355_i0 PRJNA1123309 64735 243 0.917647 2.22988221 Minisyncoccota bacterium 2053589 Bacteria Bacteria 152 8.289999999999999e-45   NR MDR3571298.1 2053589 g64355 i0 86.3 0.987654320987654 80 11 98.8 0 1 240 70 149 MDR3571298.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 240 152 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31302503 31302503 PRJNA1123309_P_NODE_61415_length_245_cov_0.906977_g61035_i0 PRJNA1123309 61415 245 0.906977 2.22209365 Patescibacteria group bacterium 2052139 Bacteria Bacteria 45.1 0.00595   NR MDD4477115.1 2052139 g61035 i0 36.2 0.844897959183673 69 39 80.8 2 215 18 95 161 MDD4477115.1 hypothetical protein [Patescibacteria group bacterium] diamond 207 45.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31334022 31334022 PRJNA1123309_P_NODE_44856_length_258_cov_1.616216_g44476_i0 PRJNA1123309 44856 258 1.616216 4.16983728 Candidatus Moraniibacteriota bacterium 2045217 Bacteria Bacteria 68.9 4.09e-12   NR NTU66797.1 2045217 g44476 i0 41.1 0.848837209302326 73 43 84.9 0 39 257 2 74 NTU66797.1 NAD(P)H-dependent oxidoreductase [Candidatus Moraniibacteriota bacterium] diamond 219 68.9 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moraniibacteriota bacterium
31365970 31365970 PRJNA1123309_P_NODE_64436_length_243_cov_0.917647_g64056_i0 PRJNA1123309 64436 243 0.917647 2.22988221 Candidatus Roizmanbacteria bacterium 2282149 Bacteria Bacteria 46.6 0.00165   NR QQR64025.1 2282149 g64056 i0 59.5 0.518518518518518 42 13 51.9 1 233 108 101 138 QQR64025.1 MAG: hypothetical protein IPH70_00595 [Candidatus Roizmanbacteria bacterium] diamond 126 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium
31524049 31524049 PRJNA1123309_P_NODE_55636_length_248_cov_0.891429_g55256_i0 PRJNA1123309 55636 248 0.891429 2.21074392 Candidatus Sumerlaeaceae bacterium 2315423 Bacteria Bacteria 119 1.07e-29   NR MCX7717181.1 2315423 g55256 i0 69.5 0.991935483870968 82 25 99.2 0 246 1 196 277 MCX7717181.1 dihydrolipoyl dehydrogenase [Candidatus Sumerlaeaceae bacterium] diamond 246 119 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae   Candidatus Sumerlaeaceae bacterium
31734314 31734314 PRJNA1123309_P_NODE_59457_length_246_cov_0.901734_g59077_i0 PRJNA1123309 59457 246 0.901734 2.21826564 Bacteria 2 Bacteria Bacteria 110 5.510000000000001e-29   NR KKP55450.1 1619088 g59077 i0 76.1 4.92682926829268 67 16 81.7 0 40 240 54 120 KKP55450.1 MAG: N utilization substance protein B-like protein [candidate division WS6 bacterium GW2011_GWB1_33_6] diamond 1212 111 0.990990990990991 Bacteria Bacteria candidate phyla             candidate division WS6 bacterium GW2011_GWB1_33_6
32756873 32756873 PRJNA1123309_P_NODE_29280_length_300_cov_2.008811_g28900_i0 PRJNA1123309 29280 300 2.008811 6.026433 Minisyncoccota bacterium 2053589 Bacteria Bacteria 55.8 5.7e-7   NR MBP9760198.1 2053589 g28900 i0 36.6 4.66 93 51 91 2 23 295 37 123 MBP9760198.1 50S ribosomal protein L6 [Candidatus Paceibacterota bacterium] diamond 1398 55.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;