RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1122875" and tax_phylum = "Nanobdellota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Nanobdellota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1122875 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29438190 29438190 PRJNA1122875_P_NODE_45730_length_249_cov_0.875000_g45506_i0 PRJNA1122875 45730 249 0.875 2.17875 Nanoarchaeota archaeon 2026764 Archaea Archaea 45.1 0.00465   NR RLG16828.1 2026764 g45506 i0 42.4 1.32530120481928 59 32 71.1 1 245 69 159 215 RLG16828.1 MAG: 50S ribosomal protein L1 [Nanoarchaeota archaeon] diamond 330 45.1 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32283391 32283391 PRJNA1122875_P_NODE_28659_length_307_cov_1.094017_g28435_i0 PRJNA1122875 28659 307 1.094017 3.35863219 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 50.1 3.86e-5   NR HZX45076.1 2910166 g28435 i0 44.4 1.5928338762215 54 29 52.8 1 3 164 60 112 HZX45076.1 hypothetical protein [Candidatus Nanoarchaeia archaeon] diamond 489 50.1 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;