RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1122875" and tax_phylum = "Candidatus Poribacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA1122875 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26721561 26721561 PRJNA1122875_P_NODE_44181_length_250_cov_0.870056_g43957_i0 PRJNA1122875 44181 250 0.870056 2.17514 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 109 1.06e-26   NR MBI5115232.1 2026781 g43957 i0 62.2 1.968 82 31 98.4 0 5 250 158 239 MBI5115232.1 cysteine synthase family protein [Candidatus Poribacteria bacterium] diamond 492 109 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
27196386 27196386 PRJNA1122875_P_NODE_36002_length_276_cov_1.684729_g35778_i0 PRJNA1122875 36002 276 1.684729 4.64985204 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 46.2 0.00251   NR RKU25178.1 2026781 g35778 i0 31.2 2 93 56 97.8 2 7 276 69 156 RKU25178.1 MAG: hypothetical protein C6497_16655 [Candidatus Poribacteria bacterium] diamond 552 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
29754145 29754145 PRJNA1122875_P_NODE_50431_length_244_cov_0.900585_g50207_i0 PRJNA1122875 50431 244 0.900585 2.1974274 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 46.6 0.00168   NR MCY4403128.1 2026781 g50207 i0 42.6 3.63934426229508 68 30 83.6 2 204 1 30 88 MCY4403128.1 dockerin type I domain-containing protein [Candidatus Poribacteria bacterium] diamond 888 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
29933177 29933177 PRJNA1122875_P_NODE_15271_length_427_cov_1.844633_g15047_i0 PRJNA1122875 15271 427 1.844633 7.87658291 Bacillati 1783272 Bacteria Bacteria 54.3 2.13e-5   NR MCE2412708.1 2026781 g15047 i0 32.1 2.66978922716628 81 50 53.4 1 415 188 71 151 MCE2412708.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 1140 54.7 0.992687385740402 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30607161 30607161 PRJNA1122875_P_NODE_35193_length_279_cov_1.495146_g34969_i0 PRJNA1122875 35193 279 1.495146 4.17145734 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 114 5.14e-27   NR RKU29921.1 2026781 g34969 i0 59.8 5.95698924731183 92 35 98.9 1 2 277 566 655 RKU29921.1 MAG: NAD(+) synthase [Candidatus Poribacteria bacterium] diamond 1662 114 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30986540 30986540 PRJNA1122875_P_NODE_15334_length_426_cov_1.991501_g15110_i0 PRJNA1122875 15334 426 1.991501 8.48379426 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 52.4 1.14e-4   NR MYB64849.1 2026781 g15110 i0 50 2.20422535211268 48 24 33.8 0 15 158 565 612 MYB64849.1 T9SS type A sorting domain-containing protein [Candidatus Poribacteria bacterium] diamond 939 52.4 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32504825 32504825 PRJNA1122875_P_NODE_38619_length_267_cov_1.448454_g38395_i0 PRJNA1122875 38619 267 1.448454 3.86737218 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 64.7 4.51e-10   NR MBP98485.1 2026781 g38395 i0 38.9 0.808988764044944 72 44 80.9 0 237 22 154 225 MBP98485.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 216 64.7 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;