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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA1120771" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 24 ✖

tax_clade 1

bioproject 1

  • PRJNA1120771 · 24 ✖

analysis 1

  • diamond · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2303874 2303874 PRJNA1120771_S_NODE_26322_length_234_cov_1.821990_g25922_i0 PRJNA1120771 26322 234 1.82199 4.2634566 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 117 1.2699999999999998e-31   NR KAF0738771.1 100861 g25922 i0 70.5 16.8846153846154 78 23 100 0 1 234 31 108 KAF0738771.1 hypothetical protein Ae201684_005384 [Aphanomyces euteiches] diamond 3951 117 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
18128442 18128442 PRJNA1120771_S_NODE_8275_length_359_cov_10.186709_g7875_i0 PRJNA1120771 8275 359 10.186709 36.57028531 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 118 7.689999999999999e-30   NR RHY34833.1 157072 g7875 i0 69 5.00557103064067 87 26 71.9 1 1 258 18 104 RHY34833.1 hypothetical protein DYB32_000612 [Aphanomyces invadans] diamond 1797 118 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
27164774 27164774 PRJNA1120771_S_NODE_4582_length_443_cov_63.240000_g4183_i0 PRJNA1120771 4582 443 63.24 280.1532 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 103 1.0199999999999999e-23   NR TYZ60440.1 1485010 g4183 i0 49.5 0.683972911963883 101 51 68.4 0 23 325 176 276 TYZ60440.1 hypothetical protein PybrP1_009390, partial [[Pythium] brassicae (nom. inval.)] diamond 303 103 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
27185603 27185603 PRJNA1120771_S_NODE_24822_length_240_cov_1.989848_g24422_i0 PRJNA1120771 24822 240 1.989848 4.7756352 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 49.7 1.03e-4   NR DAZ95385.1 4803 g24422 i0 61 4.6125 41 15 50 1 239 120 202 242 DAZ95385.1 TPA: hypothetical protein N0F65_001043 [Lagenidium giganteum] diamond 1107 49.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Lagenidium Lagenidium giganteum
27280706 27280706 PRJNA1120771_S_NODE_4403_length_450_cov_10.174447_g4005_i0 PRJNA1120771 4403 450 10.174447 45.7850115 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 153 1.0699999999999998e-41   NR RHY54563.1 112090 g4005 i0 62.4 5.67333333333333 125 43 80.7 1 395 33 291 415 RHY54563.1 hypothetical protein DYB38_000180 [Aphanomyces astaci] diamond 2553 153 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
27291418 27291418 PRJNA1120771_S_NODE_28123_length_228_cov_0.940541_g27723_i0 PRJNA1120771 28123 228 0.940541 2.14443348 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 60.1 2.37e-8   NR OQS06657.1 74557 g27723 i0 70.6 1.78947368421053 34 10 44.7 0 227 126 1359 1392 OQS06657.1 ATP-binding Cassette (ABC) Superfamily [Thraustotheca clavata] diamond 408 60.1 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
27512536 27512536 PRJNA1120771_S_NODE_12303_length_312_cov_5.137546_g11903_i0 PRJNA1120771 12303 312 5.137546 16.02914352 Phytophthora nicotianae 4792 SAR_Eukaryotes SAR_Eukaryotes 49.7 2.82e-4   NR KUF97777.1 4792 g11903 i0 45.3 2.80769230769231 64 31 61.5 1 39 230 308 367 KUF97777.1 Armadillo repeat-containing protein 6 [Phytophthora nicotianae] diamond 876 49.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora nicotianae
28175350 28175350 PRJNA1120771_S_NODE_22106_length_251_cov_3.721154_g21706_i0 PRJNA1120771 22106 251 3.721154 9.34009654 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0419   NR KAF0688416.1 120398 g21706 i0 38.9 0.645418326693227 54 30 64.5 1 68 229 259 309 KAF0688416.1 hypothetical protein As57867_019906 [Aphanomyces stellatus] diamond 162 42.7 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
28301790 28301790 PRJNA1120771_S_NODE_25526_length_237_cov_2.953608_g25126_i0 PRJNA1120771 25526 237 2.953608 7.00005096 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 85.5 6.39e-19   NR KAJ0410394.1 114742 g25126 i0 64.3 2.65822784810127 70 24 88.6 1 211 2 84 152 KAJ0410394.1 hypothetical protein P43SY_002726 [Pythium insidiosum] diamond 630 85.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
29248936 29248936 PRJNA1120771_S_NODE_7369_length_374_cov_2.628399_g6969_i0 PRJNA1120771 7369 374 2.628399 9.83021226 Plasmopara halstedii 4781 SAR_Eukaryotes SAR_Eukaryotes 68.6 9.01e-12   NR XP_024575058.1 4781 g6969 i0 70.2 4.52406417112299 47 14 37.7 0 3 143 96 142 XP_024575058.1 60s ribosomal protein l32-1-like [Plasmopara halstedii] diamond 1692 68.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
29375317 29375317 PRJNA1120771_S_NODE_20469_length_259_cov_1.175926_g20069_i0 PRJNA1120771 20469 259 1.175926 3.04564834 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 85.5 3.48e-17   NR OQR83732.1 1202772 g20069 i0 52.9 7.88803088803089 85 40 98.5 0 3 257 309 393 OQR83732.1 phosphatidylserine decarboxylase [Achlya hypogyna] diamond 2043 85.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
29596030 29596030 PRJNA1120771_S_NODE_36250_length_203_cov_3.287500_g35850_i0 PRJNA1120771 36250 203 3.2875 6.673625 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 60.1 1.52e-8   NR TMW68322.1 41045 g35850 i0 45 0.886699507389163 60 31 88.7 1 201 22 276 333 TMW68322.1 hypothetical protein Poli38472_005790 [Pythium oligandrum] diamond 180 60.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
29754081 29754081 PRJNA1120771_S_NODE_5211_length_424_cov_1.950131_g4811_i0 PRJNA1120771 5211 424 1.950131 8.26855544 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 59.3 2.09e-7   NR RQM19845.1 112090 g4811 i0 48.7 1.07547169811321 76 36 53.8 2 27 254 167 239 RQM19845.1 hypothetical protein B5M09_000630 [Aphanomyces astaci] diamond 456 59.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
29869817 29869817 PRJNA1120771_S_NODE_19431_length_264_cov_1.968326_g19031_i0 PRJNA1120771 19431 264 1.968326 5.19638064 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 127 2.12e-33   NR OQR94235.1 74557 g19031 i0 76.7 4.14772727272727 73 17 83 0 2 220 278 350 OQR94235.1 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial precursor [Thraustotheca clavata] diamond 1095 127 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
30007060 30007060 PRJNA1120771_S_NODE_26611_length_233_cov_1.368421_g26211_i0 PRJNA1120771 26611 233 1.368421 3.18842093 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 57.4 3.92e-8   NR GLD91582.1 114742 g26211 i0 48.6 2.78111587982833 72 29 92.7 3 18 233 81 144 GLD91582.1 hypothetical protein PINS_up000115 [Pythium insidiosum] diamond 648 57.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
30122426 30122426 PRJNA1120771_S_NODE_30112_length_221_cov_4.398876_g29712_i0 PRJNA1120771 30112 221 4.398876 9.72151596 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 110 4.82e-26   NR KAJ8571710.1 4785 g29712 i0 72.3 9.76018099547511 65 18 88.2 0 10 204 535 599 KAJ8571710.1 hypothetical protein ON010_g5124 [Phytophthora cinnamomi] diamond 2157 110 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
30185657 30185657 PRJNA1120771_S_NODE_26052_length_235_cov_1.786458_g25652_i0 PRJNA1120771 26052 235 1.786458 4.1981763 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 81.3 1.47e-16   NR RAW27721.1 29920 g25652 i0 52.6 5.08085106382979 78 30 90.6 1 2 214 153 230 RAW27721.1 40S ribosomal protein [Phytophthora cactorum] diamond 1194 81.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
31207074 31207074 PRJNA1120771_S_NODE_4035_length_465_cov_12.066351_g3641_i0 PRJNA1120771 4035 465 12.066351 56.10853215 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 60.1 3.12e-7   NR CCI49071.1 65357 g3641 i0 36.9 0.664516129032258 103 62 65.2 2 441 139 295 396 CCI49071.1 unnamed protein product [Albugo candida] diamond 309 60.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
31323210 31323210 PRJNA1120771_S_NODE_7695_length_368_cov_3.353846_g7295_i0 PRJNA1120771 7695 368 3.353846 12.34215328 root 1 Root_unresolved Root_unresolved 157 1.73e-44   NR OQS04471.1 74557 g7295 i0 67 8.1929347826087 112 36 90.5 1 368 36 200 311 OQS04471.1 nuclear migration protein nudC [Thraustotheca clavata] diamond 3015 157 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
31681756 31681756 PRJNA1120771_S_NODE_13957_length_298_cov_2.376471_g13557_i0 PRJNA1120771 13957 298 2.376471 7.08188358 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 84.7 4.27e-17   NR GLD97402.1 114742 g13557 i0 51.3 1.67114093959732 80 38 80.5 1 1 240 217 295 GLD97402.1 hypothetical protein PINS_up006086 [Pythium insidiosum] diamond 498 84.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
31871690 31871690 PRJNA1120771_S_NODE_18857_length_267_cov_2.196429_g18457_i0 PRJNA1120771 18857 267 2.196429 5.86446543 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 49.3 1.21e-4   NR XP_008874127.1 157072 g18457 i0 72.4 0.325842696629214 29 8 32.6 0 256 170 153 181 XP_008874127.1 ADP-ribosylation factor 1 [Aphanomyces invadans] diamond 87 49.3 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
32125077 32125077 PRJNA1120771_S_NODE_9918_length_336_cov_11.959044_g9518_i0 PRJNA1120771 9918 336 11.959044 40.18238784 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 127 2.2e-31   NR KAL0589997.1 65357 g9518 i0 60.8 4.3125 97 38 86.6 0 335 45 1140 1236 KAL0589997.1 hypothetical protein ABG067_001964 [Albugo candida] diamond 1449 127 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
32367437 32367437 PRJNA1120771_S_NODE_32379_length_215_cov_1.517442_g31979_i0 PRJNA1120771 32379 215 1.517442 3.2625003 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 100 1.41e-23   NR KAG1704188.1 4784 g31979 i0 70.4 11.9720930232558 71 19 96.3 1 213 7 248 318 KAG1704188.1 hypothetical protein DVH05_006198 [Phytophthora capsici] diamond 2574 101 0.99009900990099 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora capsici
32473133 32473133 PRJNA1120771_S_NODE_11099_length_324_cov_1.772242_g10699_i0 PRJNA1120771 11099 324 1.772242 5.74206408 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 79.3 7.53e-15   NR TMW62145.1 41045 g10699 i0 40.4 1.00925925925926 109 55 91.7 1 16 312 227 335 TMW62145.1 hypothetical protein Poli38472_009638 [Pythium oligandrum] diamond 327 79.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;