RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

26 rows where analysis = "diamond", bioproject = "PRJNA1120771" and tax_phylum = "Ciliophora"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 26 ✖

tax_clade 1

bioproject 1

  • PRJNA1120771 · 26 ✖

analysis 1

  • diamond · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15579400 15579400 PRJNA1120771_S_NODE_10773_length_327_cov_5.746479_g10373_i0 PRJNA1120771 10773 327 5.746479 18.79098633 root 1 Root_unresolved Root_unresolved 94.4 7.46e-22   NR NP_049576.1 5908 g10373 i0 85.1 90.1743119266055 47 7 43.1 0 3 143 97 143 NP_049576.1 NADH dehydrogenase subunit 10 [Tetrahymena pyriformis] diamond 29487 95.1 0.992639327024185 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
26690230 26690230 PRJNA1120771_S_NODE_33041_length_213_cov_2.005882_g32641_i0 PRJNA1120771 33041 213 2.005882 4.27252866 Stentor coeruleus 5963 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0131   NR OMJ80457.1 5963 g32641 i0 41.1 0.788732394366197 56 32 78.9 1 170 3 33 87 OMJ80457.1 hypothetical protein SteCoe_19257 [Stentor coeruleus] diamond 168 43.5 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
26837996 26837996 PRJNA1120771_S_NODE_12221_length_313_cov_2.959259_g11821_i0 PRJNA1120771 12221 313 2.959259 9.26248067 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 118 1.36e-31   NR OMJ80436.1 5963 g11821 i0 56.4 1.8019169329073501 94 41 90.1 0 3 284 46 139 OMJ80436.1 hypothetical protein SteCoe_19283 [Stentor coeruleus] diamond 564 118 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
27059383 27059383 PRJNA1120771_S_NODE_31282_length_218_cov_1.468571_g30882_i0 PRJNA1120771 31282 218 1.468571 3.20148478 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 81.3 4.84e-16   NR CDW79191.1 5949 g30882 i0 49.3 1.92660550458716 69 35 95 0 212 6 285 353 CDW79191.1 protein kinase 2 [Stylonychia lemnae] diamond 420 81.6 0.996323529411765 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
27291411 27291411 PRJNA1120771_S_NODE_10143_length_334_cov_2.326460_g9743_i0 PRJNA1120771 10143 334 2.32646 7.7703764 Halteria grandinella 5974 SAR_Eukaryotes SAR_Eukaryotes 93.6 1.61e-19   NR TNV87755.1 5974 g9743 i0 57 0.772455089820359 86 37 77.2 0 2 259 797 882 TNV87755.1 hypothetical protein FGO68_gene17119 [Halteria grandinella] diamond 258 93.6 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Halteriidae Halteria Halteria grandinella
27544105 27544105 PRJNA1120771_S_NODE_34704_length_209_cov_1.048193_g34304_i0 PRJNA1120771 34704 209 1.048193 2.19072337 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.0069   NR KRW98301.1 266149 g34304 i0 33.3 0.904306220095694 63 35 90.4 2 9 197 314 369 KRW98301.1 Aspartic peptidase domain [Pseudocohnilembus persalinus] diamond 189 44.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
28985967 28985967 PRJNA1120771_S_NODE_22188_length_251_cov_2.091346_g21788_i0 PRJNA1120771 22188 251 2.091346 5.24927846 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 60.5 2.43e-8   NR KRX03964.1 266149 g21788 i0 71.8 1.31474103585657 39 11 46.6 0 1 117 4343 4381 KRX03964.1 P-loop containing nucleoside triphosphate hydrolase [Pseudocohnilembus persalinus] diamond 330 60.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
29754074 29754074 PRJNA1120771_S_NODE_14051_length_297_cov_4.354331_g13651_i0 PRJNA1120771 14051 297 4.354331 12.93236307 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 59.3 8.36e-8   NR KRX11001.1 266149 g13651 i0 39.2 0.97979797979798 97 50 96 2 4 288 58 147 KRX11001.1 hypothetical protein PPERSA_03059 [Pseudocohnilembus persalinus] diamond 291 59.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
29785712 29785712 PRJNA1120771_S_NODE_10991_length_325_cov_2.035461_g10591_i0 PRJNA1120771 10991 325 2.035461 6.61524825 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 136 1.56e-37   NR KRX04779.1 266149 g10591 i0 61.6 0.913846153846154 99 37 90.5 1 12 305 145 243 KRX04779.1 CAP Gly-rich domain [Pseudocohnilembus persalinus] diamond 297 136 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
29817216 29817216 PRJNA1120771_S_NODE_16951_length_278_cov_2.778723_g16551_i0 PRJNA1120771 16951 278 2.778723 7.72484994 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 84.3 2.15e-17   NR KRW99552.1 266149 g16551 i0 48.4 0.982014388489209 91 47 98.2 0 277 5 158 248 KRW99552.1 hypothetical protein PPERSA_01198 [Pseudocohnilembus persalinus] diamond 273 84.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
29817222 29817222 PRJNA1120771_S_NODE_7891_length_365_cov_2.027950_g7491_i0 PRJNA1120771 7891 365 2.02795 7.4020175 Paramecium gigas 2709424 SAR_Eukaryotes SAR_Eukaryotes 47.8 0.00237   NR YP_010183548.1 2709424 g7491 i0 44.1 0.920547945205479 59 32 48.5 1 263 87 246 303 YP_010183548.1 Ymf66-like protein [Paramecium gigas] diamond 336 47.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium gigas
29849043 29849043 PRJNA1120771_S_NODE_15391_length_288_cov_2.126531_g14991_i0 PRJNA1120771 15391 288 2.126531 6.12440928 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 48.9 3.84e-4   NR CAG9317093.1 1481888 g14991 i0 27.9 2.61458333333333 86 61 89.6 1 287 30 204 288 CAG9317093.1 unnamed protein product [Blepharisma stoltei] diamond 753 48.9 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
29869815 29869815 PRJNA1120771_S_NODE_12051_length_315_cov_1.599265_g11651_i0 PRJNA1120771 12051 315 1.599265 5.03768475 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 68.6 4.53e-11   NR XP_001457064.1 5888 g11651 i0 45.5 3.27619047619048 88 48 83.8 0 310 47 213 300 XP_001457064.1 uncharacterized protein GSPATT00022840001 [Paramecium tetraurelia] diamond 1032 68.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
30070028 30070028 PRJNA1120771_S_NODE_11092_length_324_cov_2.167260_g10692_i0 PRJNA1120771 11092 324 2.16726 7.0219224 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 104 8.57e-26   NR CAI2383594.1 5936 g10692 i0 62 3.18518518518519 79 29 73.1 1 296 60 84 161 CAI2383594.1 unnamed protein product [Moneuplotes crassus] diamond 1032 104 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
30544061 30544061 PRJNA1120771_S_NODE_17333_length_276_cov_1.493562_g16933_i0 PRJNA1120771 17333 276 1.493562 4.12223112 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 59.3 8.26e-8   NR XP_004024159.1 5932 g16933 i0 48.1 0.565217391304348 52 27 56.5 0 1 156 482 533 XP_004024159.1 hypothetical protein IMG5_199550 [Ichthyophthirius multifiliis] diamond 156 59.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
30701963 30701963 PRJNA1120771_S_NODE_9314_length_344_cov_3.571429_g8914_i0 PRJNA1120771 9314 344 3.571429 12.28571576 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 51.6 7.42e-5   NR CAG9317662.1 1481888 g8914 i0 54.3 0.401162790697674 46 21 40.1 0 327 190 227 272 CAG9317662.1 unnamed protein product [Blepharisma stoltei] diamond 138 51.6 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
30849227 30849227 PRJNA1120771_S_NODE_27094_length_231_cov_1.851064_g26694_i0 PRJNA1120771 27094 231 1.851064 4.27595784 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 50.4 5.45e-5   NR KAL4464655.1 5901 g26694 i0 35.4 3.27272727272727 65 42 84.4 0 211 17 92 156 KAL4464655.1 hypothetical protein ABPG74_011216 [Tetrahymena malaccensis] diamond 756 50.8 0.992125984251969 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis
30975768 30975768 PRJNA1120771_S_NODE_23874_length_244_cov_1.298507_g23474_i0 PRJNA1120771 23874 244 1.298507 3.16835708 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 91.3 4e-20   NR XP_001448522.1 5888 g23474 i0 74.2 4.00819672131148 62 16 76.2 0 232 47 199 260 XP_001448522.1 uncharacterized protein GSPATT00039432001 [Paramecium tetraurelia] diamond 978 91.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
31007231 31007231 PRJNA1120771_S_NODE_9254_length_345_cov_2.016556_g8854_i0 PRJNA1120771 9254 345 2.016556 6.9571182 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 79.7 1.41e-15   NR XP_001009414.2 312017 g8854 i0 43.2 6.50434782608696 95 54 82.6 0 343 59 119 213 XP_001009414.2 50S ribosomal protein L1P [Tetrahymena thermophila SB210] diamond 2244 79.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
31018027 31018027 PRJNA1120771_S_NODE_13955_length_298_cov_2.388235_g13555_i0 PRJNA1120771 13955 298 2.388235 7.1169403 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 86.7 2.77e-17   NR KRX07411.1 266149 g13555 i0 53.1 0.815436241610738 81 38 81.5 0 291 49 888 968 KRX07411.1 P-loop containing nucleoside triphosphate hydrolase [Pseudocohnilembus persalinus] diamond 243 86.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
31049858 31049858 PRJNA1120771_S_NODE_25635_length_237_cov_1.345361_g25235_i0 PRJNA1120771 25635 237 1.345361 3.18850557 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 67.8 5.26e-11   NR CAG9329529.1 1481888 g25235 i0 46.1 4.83544303797468 76 41 96.2 0 228 1 74 149 CAG9329529.1 unnamed protein product [Blepharisma stoltei] diamond 1146 67.8 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
31428887 31428887 PRJNA1120771_S_NODE_30796_length_219_cov_2.840909_g30396_i0 PRJNA1120771 30796 219 2.840909 6.22159071 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.0255   NR CDW80593.1 5949 g30396 i0 52.6 1.02739726027397 38 17 52.1 1 187 74 233 269 CDW80593.1 UNKNOWN [Stylonychia lemnae] diamond 225 42.7 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
31555709 31555709 PRJNA1120771_S_NODE_34136_length_210_cov_2.532934_g33736_i0 PRJNA1120771 34136 210 2.532934 5.3191614 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 49.3 4.88e-5   NR XP_001026650.1 312017 g33736 i0 38 1.41428571428571 50 31 71.4 0 209 60 45 94 XP_001026650.1 40S ribosomal protein S10, putative [Tetrahymena thermophila SB210] diamond 297 49.3 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
31587271 31587271 PRJNA1120771_S_NODE_26316_length_234_cov_1.821990_g25916_i0 PRJNA1120771 26316 234 1.82199 4.2634566 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 54.7 2.06e-6   NR KRX09304.1 266149 g25916 i0 35.5 1.43589743589744 62 38 76.9 1 7 186 194 255 KRX09304.1 Thioredoxin-like fold [Pseudocohnilembus persalinus] diamond 336 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
31650128 31650128 PRJNA1120771_S_NODE_18637_length_268_cov_3.475556_g18237_i0 PRJNA1120771 18637 268 3.475556 9.31449008 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 62.8 6.55e-10   NR KRX01081.1 266149 g18237 i0 49.3 0.772388059701492 69 35 77.2 0 264 58 53 121 KRX01081.1 hypothetical protein PPERSA_02177 [Pseudocohnilembus persalinus] diamond 207 62.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
32346626 32346626 PRJNA1120771_S_NODE_10439_length_331_cov_1.506944_g10039_i0 PRJNA1120771 10439 331 1.506944 4.98798464 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 74.7 1.5e-13   NR CAG9314398.1 1481888 g10039 i0 38.5 0.870090634441088 96 54 86.1 2 3 287 150 241 CAG9314398.1 unnamed protein product [Blepharisma stoltei] diamond 288 74.7 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;