RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1120771" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1120771 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29785713 29785713 PRJNA1120771_S_NODE_14491_length_294_cov_4.159363_g14091_i0 PRJNA1120771 14491 294 4.159363 12.22852722 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 79.3 2.27e-17   NR MES1911722.1 1215613 g14091 i0 73.9 0.469387755102041 46 12 46.9 0 2 139 8 53 MES1911722.1 hypothetical protein [Cercozoa sp. M6MM] diamond 138 79.3 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
32378097 32378097 PRJNA1120771_S_NODE_17639_length_274_cov_1.852814_g17239_i0 PRJNA1120771 17639 274 1.852814 5.07671036 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 83.2 2.55e-16   NR MES1915627.1 1215613 g17239 i0 51.9 1.67518248175182 77 37 84.3 0 272 42 351 427 MES1915627.1 hypothetical protein [Cercozoa sp. M6MM] diamond 459 83.2 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;