RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1120771" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA1120771 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19402424 19402424 PRJNA1120771_S_NODE_17996_length_272_cov_1.899563_g17596_i0 PRJNA1120771 17996 272 1.899563 5.16681136 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 110 6.06e-26   NR AVM87439.1 3063761 g17596 i0 60.4 1.00367647058824 91 33 97.1 1 272 9 457 547 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 273 110 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
27291413 27291413 PRJNA1120771_S_NODE_13703_length_300_cov_2.708171_g13303_i0 PRJNA1120771 13703 300 2.708171 8.124513 Andean potato mild mosaic virus 1296569 Viruses Viruses 43.5 0.0383   NR WBO25746.1 1296569 g13303 i0 38.9 0.54 54 33 54 0 256 95 526 579 WBO25746.1 putative movement protein [Andean potato mild mosaic virus] diamond 162 43.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Tymoviridae Tymovirus Tymovirus mosandigenum
28554577 28554577 PRJNA1120771_S_NODE_20607_length_258_cov_2.427907_g20207_i0 PRJNA1120771 20607 258 2.427907 6.26400006 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 94 4.34e-20   NR AVM87439.1 3063761 g20207 i0 53.7 0.953488372093023 82 38 95.3 0 247 2 928 1009 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 246 94 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
30733556 30733556 PRJNA1120771_S_NODE_25834_length_236_cov_1.803109_g25434_i0 PRJNA1120771 25834 236 1.803109 4.25533724 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 159 3.6099999999999996e-43   NR WKU61618.1 3063761 g25434 i0 98.7 0.991525423728814 78 1 99.2 0 236 3 1923 2000 WKU61618.1 polyprotein [Zebrafish picornavirus 2] diamond 234 159 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;