RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA1120771" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 8 ✖

bioproject 1

  • PRJNA1120771 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26753228 26753228 PRJNA1120771_S_NODE_19261_length_265_cov_1.175676_g18861_i0 PRJNA1120771 19261 265 1.175676 3.1155414 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 47 0.00132   NR KAJ4459753.1 342808 g18861 i0 37.7 0.690566037735849 61 38 69.1 0 250 68 126 186 KAJ4459753.1 putative SNF7 family protein [Paratrimastix pyriformis] diamond 183 47 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
27006697 27006697 PRJNA1120771_S_NODE_18022_length_272_cov_1.414847_g17622_i0 PRJNA1120771 18022 272 1.414847 3.84838384 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 92.4 2.08e-21   NR KAJ4461579.1 342808 g17622 i0 47.1 0.959558823529412 87 44 96 1 6 266 59 143 KAJ4461579.1 hypothetical protein PAPYR_2178 [Paratrimastix pyriformis] diamond 261 92.4 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
30923401 30923401 PRJNA1120771_S_NODE_15694_length_286_cov_2.843621_g15294_i0 PRJNA1120771 15694 286 2.843621 8.13275606 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 43.1 0.0485   NR KAJ3439615.1 1746091 g15294 i0 29.1 0.576923076923077 55 39 57.7 0 1 165 3509 3563 KAJ3439615.1 beige/beach-related [Anaeramoeba flamelloides] diamond 165 43.1 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
31650126 31650126 PRJNA1120771_S_NODE_16277_length_282_cov_4.368201_g15877_i0 PRJNA1120771 16277 282 4.368201 12.31832682 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 86.7 2.27e-17   NR KAJ5080783.1 1746090 g15877 i0 47.1 1.80851063829787 85 45 90.4 0 282 28 911 995 KAJ5080783.1 alpha-actinin-2 [Anaeramoeba ignava] diamond 510 86.7 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
31713604 31713604 PRJNA1120771_S_NODE_5197_length_424_cov_6.377953_g4797_i0 PRJNA1120771 5197 424 6.377953 27.04252072 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 62.4 2.94e-8   NR KAJ5080539.1 1746090 g4797 i0 65.9 1.25943396226415 41 14 29 0 423 301 295 335 KAJ5080539.1 guanine nucleotide-binding protein g(o) subunit alpha [Anaeramoeba ignava] diamond 534 62.4 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
31808507 31808507 PRJNA1120771_S_NODE_26777_length_232_cov_2.608466_g26377_i0 PRJNA1120771 26777 232 2.608466 6.05164112 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 50.1 8.78e-5   NR KAJ3426080.1 1746091 g26377 i0 64.9 0.478448275862069 37 13 47.8 0 232 122 824 860 KAJ3426080.1 hypothetical protein M0812_28528 [Anaeramoeba flamelloides] diamond 111 50.1 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
31934910 31934910 PRJNA1120771_S_NODE_37997_length_197_cov_2.259740_g37597_i0 PRJNA1120771 37997 197 2.25974 4.4516878 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 52.8 5.13e-6   NR KAJ5075624.1 1746090 g37597 i0 40.6 1.88832487309645 64 35 92.9 1 11 193 212 275 KAJ5075624.1 hypothetical protein M0811_07194 [Anaeramoeba ignava] diamond 372 52.8 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
32693712 32693712 PRJNA1120771_S_NODE_18880_length_267_cov_1.553571_g18480_i0 PRJNA1120771 18880 267 1.553571 4.14803457 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 53.9 5.53e-6   NR KAJ5076591.1 1746090 g18480 i0 30.2 1.07865168539326 96 57 98.9 3 3 266 348 441 KAJ5076591.1 beta-12-xylosyltransferase [Anaeramoeba ignava] diamond 288 53.9 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;