RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1120586" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA1120586 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27954535 27954535 PRJNA1120586_P_NODE_38945_length_236_cov_5.209581_g38754_i0 PRJNA1120586 38945 236 5.209581 12.29461116 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 158 9.17e-43   NR WKU61618.1 3063761 g38754 i0 98.7 0.991525423728814 78 1 99.2 0 235 2 1917 1994 WKU61618.1 polyprotein [Zebrafish picornavirus 2] diamond 234 158 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
29880734 29880734 PRJNA1120586_P_NODE_1891_length_749_cov_5.892647_g1721_i0 PRJNA1120586 1891 749 5.892647 44.13592603 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 174 1.45e-45   NR AVM87455.1 3063761 g1721 i0 40.6 0.977303070761015 244 132 92.9 4 699 4 761 1003 AVM87455.1 polyprotein [Wenling hoplichthys picornavirus] diamond 732 174 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;