RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1120586" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA1120586 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18127541 18127541 PRJNA1120586_P_NODE_19315_length_303_cov_1.230769_g19124_i0 PRJNA1120586 19315 303 1.230769 3.72923007 Halorubrum sp. JWXQ-INN 858 2690782 Archaea Archaea 93.6 9.56e-20   NR WP_159487179.1 2690782 g19124 i0 62.2 0.97029702970297 98 37 97 0 294 1 193 290 WP_159487179.1 stage II sporulation protein M [Halorubrum sp. JWXQ-INN 858] diamond 294 93.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum sp. JWXQ-INN 858
29912314 29912314 PRJNA1120586_P_NODE_44451_length_232_cov_0.883436_g44260_i0 PRJNA1120586 44451 232 0.883436 2.04957152 Halobacteriales archaeon 1904752 Archaea Archaea 46.2 0.00161   NR MFP4590188.1 1904752 g44260 i0 62.5 1.25431034482759 32 12 41.4 0 1 96 200 231 MFP4590188.1 sugar phosphate nucleotidyltransferase [Halobacteriales archaeon] diamond 291 46.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon
32568077 32568077 PRJNA1120586_P_NODE_40119_length_235_cov_0.867470_g39928_i0 PRJNA1120586 40119 235 0.86747 2.0385545 Halolamina sp. 1940283 Archaea Archaea 131 1.56e-33   NR WP_332326263.1 1940283 g39928 i0 78.7 0.957446808510638 75 16 95.7 0 4 228 437 511 WP_332326263.1 S9 family peptidase [Halolamina sp.] diamond 225 131 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halolamina Halolamina sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;