RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA1120586" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 11 ✖

bioproject 1

  • PRJNA1120586 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4103449 4103449 PRJNA1120586_P_NODE_51524_length_227_cov_0.911392_g51333_i0 PRJNA1120586 51524 227 0.911392 2.06885984 Planctomycetota bacterium 2026780 Bacteria Bacteria 164 6.72e-45   NR RLT10205.1 2026780 g51333 i0 94.7 0.991189427312775 75 4 99.1 0 3 227 307 381 RLT10205.1 MAG: DUF1553 domain-containing protein [Planctomycetota bacterium] diamond 225 164 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
15578891 15578891 PRJNA1120586_P_NODE_33313_length_251_cov_1.560440_g33122_i0 PRJNA1120586 33313 251 1.56044 3.9167044 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 67.8 9.42e-13   NR RYD71399.1 2026800 g33122 i0 53.4 0.872509960159363 73 34 87.3 0 219 1 6 78 RYD71399.1 MAG: hypothetical protein EOP84_24950, partial [Verrucomicrobiaceae bacterium] diamond 219 67.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
21953030 21953030 PRJNA1120586_P_NODE_43178_length_233_cov_0.878049_g42987_i0 PRJNA1120586 43178 233 0.878049 2.04585417 Planctomyces 118 Bacteria Bacteria 156 6.59e-43   NR MFN5899559.1 37635 g42987 i0 100 3.9656652360515 77 0 99.1 0 2 232 248 324 MFN5899559.1 hypothetical protein [Planctomyces sp.] diamond 924 156 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Planctomyces Planctomyces sp.
26785450 26785450 PRJNA1120586_P_NODE_44461_length_232_cov_0.883436_g44270_i0 PRJNA1120586 44461 232 0.883436 2.04957152 Opitutaceae bacterium 2006848 Bacteria Bacteria 78.6 3.22e-16   NR MFA5056513.1 2006848 g44270 i0 50 1.00862068965517 78 38 99.6 1 1 231 15 92 MFA5056513.1 hypothetical protein [Opitutaceae bacterium] diamond 234 78.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
29280467 29280467 PRJNA1120586_P_NODE_34109_length_249_cov_1.311111_g33918_i0 PRJNA1120586 34109 249 1.311111 3.26466639 Planctomycetota bacterium 2026780 Bacteria Bacteria 84.3 1.36e-18   NR MCH8147290.1 2026780 g33918 i0 100 0.506024096385542 42 0 50.6 0 3 128 100 141 MCH8147290.1 aspartate 1-decarboxylase [Planctomycetota bacterium] diamond 126 84.3 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29690714 29690714 PRJNA1120586_P_NODE_41870_length_234_cov_0.872727_g41679_i0 PRJNA1120586 41870 234 0.872727 2.04218118 Opitutaceae bacterium 2006848 Bacteria Bacteria 65.1 4.53e-10   NR MCE2861284.1 2006848 g41679 i0 93.9 1.26923076923077 33 2 42.3 0 1 99 731 763 MCE2861284.1 oligopeptide transporter, OPT family [Opitutaceae bacterium] diamond 297 65.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
30007051 30007051 PRJNA1120586_P_NODE_25171_length_276_cov_2.647343_g24980_i0 PRJNA1120586 25171 276 2.647343 7.30666668 Planctomycetota bacterium 2026780 Bacteria Bacteria 122 3.07e-32   NR MCH8147293.1 2026780 g24980 i0 100 0.619565217391304 57 0 62 0 276 106 186 242 MCH8147293.1 hypothetical protein [Planctomycetota bacterium] diamond 171 122 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30564543 30564543 PRJNA1120586_P_NODE_15833_length_324_cov_1.101961_g15642_i0 PRJNA1120586 15833 324 1.101961 3.57035364 Pseudomonadati 3379134 Bacteria Bacteria 206 2.99e-64   NR MBA4040115.1 37635 g15642 i0 100 2 108 0 100 0 324 1 97 204 MBA4040115.1 glycosyltransferase [Planctomyces sp.] diamond 648 206 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Planctomyces Planctomyces sp.
31081244 31081244 PRJNA1120586_P_NODE_23935_length_281_cov_2.193396_g23744_i0 PRJNA1120586 23935 281 2.193396 6.16344276 Planctomyces sp. 37635 Bacteria Bacteria 157 2.31e-45   NR MBA4040115.1 37635 g23744 i0 96.4 0.886120996441281 83 3 88.6 0 32 280 1 83 MBA4040115.1 glycosyltransferase [Planctomyces sp.] diamond 249 157 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Planctomyces Planctomyces sp.
31460795 31460795 PRJNA1120586_P_NODE_44076_length_232_cov_0.883436_g43885_i0 PRJNA1120586 44076 232 0.883436 2.04957152 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 155 6.889999999999998e-42   NR MEY4688418.1 2026799 g43885 i0 97.4 1.99137931034483 77 2 99.6 0 231 1 580 656 MEY4688418.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 462 155 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32568079 32568079 PRJNA1120586_P_NODE_8659_length_404_cov_2.047761_g8468_i0 PRJNA1120586 8659 404 2.047761 8.27295444 Planctomycetota bacterium 2026780 Bacteria Bacteria 282 8.089999999999999e-90   NR MCH8147294.1 2026780 g8468 i0 100 0.995049504950495 134 0 99.5 0 403 2 257 390 MCH8147294.1 non-ribosomal peptide synthetase [Planctomycetota bacterium] diamond 402 282 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;