RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1120586" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA1120586 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28101537 28101537 PRJNA1120586_P_NODE_37245_length_241_cov_1.255814_g37054_i0 PRJNA1120586 37245 241 1.255814 3.02651174 Bacteria 2 Bacteria Bacteria 92 1.61e-19   NR WP_335118582.1 1180 g37054 i0 55.1 20.7261410788382 78 31 92.1 1 3 224 974 1051 WP_335118582.1 amino acid adenylation domain-containing protein [Nostoc sp.] diamond 4995 92.8 0.991379310344828 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Nostoc Nostoc sp.
30323424 30323424 PRJNA1120586_P_NODE_48732_length_229_cov_0.868750_g48541_i0 PRJNA1120586 48732 229 0.86875 1.9894375 Cyanobacteria bacterium SZAS LIN-5 2807734 Bacteria Bacteria 47 9.94e-4   NR MBS2000442.1 2807734 g48541 i0 34.2 0.956331877729258 73 47 95.6 1 2 220 132 203 MBS2000442.1 glycoside hydrolase family 3 protein [Cyanobacteria bacterium SZAS LIN-5] diamond 219 47 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteria bacterium SZAS LIN-5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;