RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA1120203" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1120203 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28775317 28775317 PRJNA1120203_P_NODE_87607_length_248_cov_0.880000_g86591_i0 PRJNA1120203 87607 248 0.88 2.1824 Enterocytozoon hepatopenaei 646526 Fungi Fungi 123 4.899999999999999e-31   NR OQS54021.1 646526 g86591 i0 71.8 0.943548387096774 78 22 94.4 0 235 2 101 178 OQS54021.1 NPL4 [Enterocytozoon hepatopenaei] diamond 234 123 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
29406837 29406837 PRJNA1120203_P_NODE_68689_length_271_cov_1.323232_g67673_i0 PRJNA1120203 68689 271 1.323232 3.58595872 Enterocytozoon hepatopenaei 646526 Fungi Fungi 158 2.29e-46   NR OQS53808.1 646526 g67673 i0 83.1 0.985239852398524 89 15 98.5 0 3 269 17 105 OQS53808.1 RpL13A [Enterocytozoon hepatopenaei] diamond 267 158 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
31049827 31049827 PRJNA1120203_P_NODE_66275_length_276_cov_1.517241_g65259_i0 PRJNA1120203 66275 276 1.517241 4.18758516 Enterocytozoon bieneusi H348 481877 Fungi Fungi 142 2.63e-41   NR EED44351.1 481877 g65259 i0 78 0.989130434782609 91 20 98.9 0 274 2 19 109 EED44351.1 tRNA and rRNA cytosine-C5-methylase [Enterocytozoon bieneusi H348] diamond 273 142 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Enterocytozoon Enterocytozoon bieneusi
31112508 31112508 PRJNA1120203_P_NODE_48815_length_323_cov_3.432000_g47799_i0 PRJNA1120203 48815 323 3.432 11.08536 Enterospora canceri 1081671 Fungi Fungi 49.3 3.67e-4   NR ORD94919.1 1081671 g47799 i0 43.3 0.557275541795666 60 34 55.7 0 182 3 159 218 ORD94919.1 hypothetical protein ECANGB1_1915 [Enterospora canceri] diamond 180 49.3 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Enterospora Enterospora canceri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;