RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA1120203" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1120203 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26742437 26742437 PRJNA1120203_P_NODE_100241_length_243_cov_0.905882_g99225_i0 PRJNA1120203 100241 243 0.905882 2.20129326 root 1 Root_unresolved Root_unresolved 129 3.64e-33   NR PFX11132.1 50429 g99225 i0 85.2 12 81 12 100 0 1 243 22 102 PFX11132.1 Protein TolQ, partial [Stylophora pistillata] diamond 2916 130 0.992307692307692 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
30480916 30480916 PRJNA1120203_P_NODE_93953_length_245_cov_0.895349_g92937_i0 PRJNA1120203 93953 245 0.895349 2.19360505 Porites lobata 104759 Cnidaria other_Eukaryota 75.1 1.53e-13   NR CAH3123430.1 104759 g92937 i0 38.8 1.95918367346939 80 48 98 1 243 4 55 133 CAH3123430.1 unnamed protein product [Porites lobata] diamond 480 75.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Poritidae Porites Porites lobata
32188210 32188210 PRJNA1120203_P_NODE_85358_length_249_cov_0.875000_g84342_i0 PRJNA1120203 85358 249 0.875 2.17875 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 76.3 6.29e-14   NR XP_028405678.1 151771 g84342 i0 45.7 6.8433734939759 81 38 91.6 2 230 3 379 458 XP_028405678.1 uncharacterized protein LOC114528250 [Dendronephthya gigantea] diamond 1704 76.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;