RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA1120203" and tax_kingdom = "Thermoproteati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 11 ✖

bioproject 1

  • PRJNA1120203 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9956234 9956234 PRJNA1120203_P_NODE_89008_length_247_cov_0.885057_g87992_i0 PRJNA1120203 89008 247 0.885057 2.18609079 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 74.7 1.13e-13   NR HXX97948.1 3045160 g87992 i0 94.6 0.449392712550607 37 2 44.9 0 247 137 266 302 HXX97948.1 prohibitin family protein [Candidatus Bathyarchaeia archaeon] diamond 111 74.7 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
26848728 26848728 PRJNA1120203_P_NODE_101981_length_242_cov_0.911243_g100965_i0 PRJNA1120203 101981 242 0.911243 2.20520806 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 100 3.63e-23   NR HSF50868.1 2169593 g100965 i0 97.9 1.16528925619835 47 1 58.3 0 101 241 1 47 HSF50868.1 metallophosphoesterase [Nitrososphaeraceae archaeon] diamond 282 100 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
26975114 26975114 PRJNA1120203_P_NODE_68742_length_271_cov_1.176768_g67726_i0 PRJNA1120203 68742 271 1.176768 3.18904128 Crenarchaeota archaeon 13_1_4 2056631 Archaea Archaea 133 6.3e-34   NR OLD11911.1 1805095 g67726 i0 71.9 0.985239852398524 89 25 98.5 0 4 270 680 768 OLD11911.1 MAG: hypothetical protein AUI93_03580 [Crenarchaeota archaeon 13_1_40CM_3_52_10] diamond 267 133 1 Archaea   Thermoproteati Thermoproteota         Crenarchaeota archaeon 13_1_40CM_3_52_10
30007035 30007035 PRJNA1120203_P_NODE_79651_length_251_cov_0.865169_g78635_i0 PRJNA1120203 79651 251 0.865169 2.17157419 Candidatus Nitrosotalea sp. TS 2341020 Archaea Archaea 170 2.33e-51   NR NHI03387.1 2341020 g78635 i0 100 1.9840637450199201 83 0 99.2 0 2 250 18 100 NHI03387.1 Transketolase, C-terminal section [Candidatus Nitrosotalea sp. TS] diamond 498 170 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosotaleales Nitrosotaleaceae Nitrosotalea Candidatus Nitrosotalea sp. TS
30544036 30544036 PRJNA1120203_P_NODE_81433_length_250_cov_0.870056_g80417_i0 PRJNA1120203 81433 250 0.870056 2.17514 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 110 3.62e-27   NR TMI54946.1 2026714 g80417 i0 65.9 1.968 82 28 98.4 0 3 248 99 180 TMI54946.1 MAG: glycosyltransferase family 2 protein, partial [Candidatus Bathyarchaeota archaeon] diamond 492 110 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
30954979 30954979 PRJNA1120203_P_NODE_90134_length_247_cov_0.885057_g89118_i0 PRJNA1120203 90134 247 0.885057 2.18609079 Candidatus Nitrosopelagicus sp. 2026808 Archaea Archaea 184 9.02e-58   NR RMW40559.1 2026808 g89118 i0 100 0.995951417004049 82 0 99.6 0 2 247 80 161 RMW40559.1 MAG: hypothetical protein EA442_02320 [Candidatus Nitrosopelagicus sp.] diamond 246 184 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosopelagicus Candidatus Nitrosopelagicus sp.
31018011 31018011 PRJNA1120203_P_NODE_86135_length_248_cov_0.880000_g85119_i0 PRJNA1120203 86135 248 0.88 2.1824 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 43.5 0.0209   NR HET6800637.1 2169593 g85119 i0 36.6 1.71774193548387 71 42 82.3 1 248 45 440 510 HET6800637.1 helicase-related protein [Nitrososphaeraceae archaeon] diamond 426 43.5 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31302389 31302389 PRJNA1120203_P_NODE_96515_length_244_cov_0.900585_g95499_i0 PRJNA1120203 96515 244 0.900585 2.1974274 Candidatus Nitrosopelagicus sp. 2026808 Archaea Archaea 54.3 1.95e-6   NR RMW39113.1 2026808 g95499 i0 71.9 0.799180327868853 32 9 39.3 0 13 108 194 225 RMW39113.1 MAG: hypothetical protein EA442_04450 [Candidatus Nitrosopelagicus sp.] diamond 195 54.3 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosopelagicus Candidatus Nitrosopelagicus sp.
31650120 31650120 PRJNA1120203_P_NODE_97497_length_244_cov_0.900585_g96481_i0 PRJNA1120203 97497 244 0.900585 2.1974274 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 50.4 5.34e-6   NR RLI46183.1 2026714 g96481 i0 50 0.540983606557377 44 22 54.1 0 242 111 32 75 RLI46183.1 MAG: hypothetical protein DRO61_09555 [Candidatus Bathyarchaeota archaeon] diamond 132 50.4 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
32756777 32756777 PRJNA1120203_P_NODE_92640_length_246_cov_0.890173_g91624_i0 PRJNA1120203 92640 246 0.890173 2.18982558 Nitrosopumilus sp. 2024843 Archaea Archaea 139 3.17e-39   NR WP_316504566.1 2024843 g91624 i0 77.8 1.9390243902439 81 18 98.8 0 3 245 97 177 WP_316504566.1 hypothetical protein [Nitrosopumilus sp.] diamond 477 139 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
32851146 32851146 PRJNA1120203_P_NODE_83720_length_249_cov_0.875000_g82704_i0 PRJNA1120203 83720 249 0.875 2.17875 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 54.3 3.45e-6   NR HYY72298.1 3045160 g82704 i0 34.9 1.86746987951807 83 53 100 1 249 1 234 315 HYY72298.1 tetratricopeptide repeat protein [Candidatus Bathyarchaeia archaeon] diamond 465 54.3 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;