RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA1120203" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 7 ✖

bioproject 1

  • PRJNA1120203 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27228007 27228007 PRJNA1120203_P_NODE_78583_length_251_cov_0.865169_g77567_i0 PRJNA1120203 78583 251 0.865169 2.17157419 Bathycoccus sp. RCC716 virus 1 2530038 Viruses Viruses 112 1.28e-26   NR QOR60232.1 2530038 g77567 i0 60.2 0.99203187250996006 83 33 99.2 0 250 2 47 129 QOR60232.1 hypothetical protein [Bathycoccus sp. RCC716 virus 1] diamond 249 112 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Bathycoccus sp. RCC716 virus 1
29659082 29659082 PRJNA1120203_P_NODE_83690_length_249_cov_0.875000_g82674_i0 PRJNA1120203 83690 249 0.875 2.17875 Bathycoccus sp. RCC11 2812571 Viruses Viruses 126 1.49e-32   NR YP_004061516.1 880159 g82674 i0 72.3 1 83 23 100 0 1 249 290 372 YP_004061516.1 hypothetical protein BpV1_086c [Bathycoccus sp. RCC1105 virus BpV1] diamond 249 126 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Bathycoccus sp. RCC1105 virus BpV
29817206 29817206 PRJNA1120203_P_NODE_94451_length_245_cov_0.895349_g93435_i0 PRJNA1120203 94451 245 0.895349 2.19360505 Ostreococcus tauri virus 2 696472 Viruses Viruses 78.6 2.02e-16   NR YP_004063629.1 696472 g93435 i0 74.4 0.52653061224489806 43 11 52.7 0 1 129 92 134 YP_004063629.1 hypothetical protein OtV2_196 [Ostreococcus tauri virus 2] diamond 129 78.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Ostreococcus tauri virus 2
30101533 30101533 PRJNA1120203_P_NODE_86932_length_248_cov_0.880000_g85916_i0 PRJNA1120203 86932 248 0.88 2.1824 Dishui Lake phycodnavirus 4 2704072 Viruses Viruses 48.1 5.18e-4   NR QIG60002.1 2704072 g85916 i0 48 0.604838709677419 50 25 60.5 1 230 81 6600 6648 QIG60002.1 glycoprotein repeat domain-containing protein [Dishui Lake phycodnavirus 4] diamond 150 48.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Dishui Lake phycodnavirus 4
31460762 31460762 PRJNA1120203_P_NODE_104656_length_241_cov_0.916667_g103640_i0 PRJNA1120203 104656 241 0.916667 2.20916747 Micromonas commoda virus 3057169 Viruses Viruses 158 1.5199999999999999e-46   NR XDR79876.1 3057169 g103640 i0 87.5 0.995850622406639 80 10 99.6 0 240 1 147 226 XDR79876.1 hypothetical protein [Micromonas commoda virus] diamond 240 158 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Micromonas commoda virus
32504760 32504760 PRJNA1120203_P_NODE_88779_length_247_cov_0.885057_g87763_i0 PRJNA1120203 88779 247 0.885057 2.18609079 Bathycoccus sp. RCC716 virus 2 2530039 Viruses Viruses 112 1.01e-27   NR QOR60448.1 2530039 g87763 i0 70.4 0.862348178137652 71 21 86.2 0 213 1 1 71 QOR60448.1 hypothetical protein [Bathycoccus sp. RCC716 virus 2] diamond 213 112 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Bathycoccus sp. RCC716 virus 2
32693683 32693683 PRJNA1120203_P_NODE_78180_length_251_cov_0.960674_g77164_i0 PRJNA1120203 78180 251 0.960674 2.41129174 Micromonas polaris virus 2008368 Viruses Viruses 66.6 4.34e-12   NR XCJ77218.1 2008368 g77164 i0 66 0.597609561752988 50 17 59.8 0 150 1 1 50 XCJ77218.1 hypothetical protein [Micromonas polaris virus] diamond 150 66.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Micromonas polaris virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;