RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA1120060" and tax_phylum = "Placozoa"

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tax_superkingdom 1

tax_phylum 1

  • Placozoa · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1120060 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28511827 28511827 PRJNA1120060_P_NODE_1392987_length_298_cov_3.004444_g1375007_i0 PRJNA1120060 1392987 298 3.004444 8.95324312 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 43.5 0.0364   NR XP_002116954.1 10228 g1375007 i0 30.2 2.03355704697987 63 37 60.4 2 104 283 191 249 XP_002116954.1 uncharacterized protein TRIADDRAFT_31721 [Trichoplax adhaerens] diamond 606 43.5 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
28648109 28648109 PRJNA1120060_P_NODE_2277347_length_262_cov_1.576720_g2259292_i0 PRJNA1120060 2277347 262 1.57672 4.1310064 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 43.5 0.0232   NR XP_002109391.1 10228 g2259292 i0 46.2 0.446564885496183 39 21 44.7 0 90 206 215 253 XP_002109391.1 uncharacterized protein TRIADDRAFT_53370 [Trichoplax adhaerens] diamond 117 43.5 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;