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contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA1120060" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA1120060 · 17 ✖

analysis 1

  • diamond · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21943427 21943427 PRJNA1120060_P_NODE_480018_length_370_cov_4.949495_g462434_i0 PRJNA1120060 480018 370 4.949495 18.3131315 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 65.9 1.34e-9   NR XP_068350114.1 1144522 g462434 i0 44.3 0.713513513513514 88 46 69.7 2 113 370 1441 1527 XP_068350114.1 uncharacterized protein TRFO_36906 [Tritrichomonas foetus] diamond 264 65.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27312238 27312238 PRJNA1120060_P_NODE_1688883_length_285_cov_3.287736_g1670879_i0 PRJNA1120060 1688883 285 3.287736 9.3700476 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 51.6 4.43e-5   NR XP_001304410.1 412133 g1670879 i0 35.5 1.97894736842105 62 40 65.3 0 98 283 161 222 XP_001304410.1 cellular macromolecule catabolic process [Trichomonas vaginalis G3] diamond 564 51.6 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27985675 27985675 PRJNA1120060_P_NODE_3579825_length_200_cov_5.905512_g3561698_i0 PRJNA1120060 3579825 200 5.905512 11.811024 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 42.7 0.0215   NR XP_001309991.1 412133 g3561698 i0 28.6 1.05 70 46 99 1 200 3 330 399 XP_001309991.1 WD40 repeat-like family [Trichomonas vaginalis G3] diamond 210 42.7 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28711502 28711502 PRJNA1120060_P_NODE_2683447_length_249_cov_0.886364_g2665366_i0 PRJNA1120060 2683447 249 0.886364 2.20704636 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 50.8 5.65e-5   NR XP_001312678.1 412133 g2665366 i0 65.7 0.819277108433735 35 10 42.2 1 105 1 113 145 XP_001312678.1 protein serine/threonine kinase protein [Trichomonas vaginalis G3] diamond 204 50.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29689148 29689148 PRJNA1120060_P_NODE_1768130_length_282_cov_1.995215_g1750119_i0 PRJNA1120060 1768130 282 1.995215 5.6265063 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 44.3 0.0157   NR XP_068350876.1 1144522 g1750119 i0 31.1 0.787234042553192 74 51 78.7 0 59 280 62 135 XP_068350876.1 Adenosine 3'-phospho 5'-phosphosulfate transporter 2 [Tritrichomonas foetus] diamond 222 44.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29880138 29880138 PRJNA1120060_P_NODE_310951_length_415_cov_3.347953_g293801_i0 PRJNA1120060 310951 415 3.347953 13.89400495 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 48.9 0.00167   NR XP_068348138.1 1144522 g293801 i0 43.1 1.20722891566265 65 37 47 0 75 269 910 974 XP_068348138.1 uncharacterized protein TRFO_10692 [Tritrichomonas foetus] diamond 501 48.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30132655 30132655 PRJNA1120060_P_NODE_498432_length_367_cov_1.731293_g480817_i0 PRJNA1120060 498432 367 1.731293 6.35384531 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 49.7 5.78e-4   NR XP_068348138.1 1144522 g480817 i0 45.8 0.392370572207084 48 26 39.2 0 19 162 927 974 XP_068348138.1 uncharacterized protein TRFO_10692 [Tritrichomonas foetus] diamond 144 49.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30880546 30880546 PRJNA1120060_P_NODE_1330834_length_303_cov_4.752174_g1312869_i0 PRJNA1120060 1330834 303 4.752174 14.39908722 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 65.5 5.28e-11   NR XP_001301380.1 412133 g1312869 i0 45.7 3.45544554455446 70 38 69.3 0 1 210 11 80 XP_001301380.1 structural constituent of ribosome [Trichomonas vaginalis G3] diamond 1047 65.9 0.993930197268589 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
30890995 30890995 PRJNA1120060_P_NODE_293854_length_422_cov_0.882521_g276788_i0 PRJNA1120060 293854 422 0.882521 3.72423862 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 45.4 0.0243   NR XP_001581284.1 412133 g276788 i0 52.6 0.270142180094787 38 16 25.6 1 299 406 14 51 XP_001581284.1 STKc MAPK15-like domain-containing protein [Trichomonas vaginalis G3] diamond 114 45.4 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
30912384 30912384 PRJNA1120060_P_NODE_1785034_length_281_cov_3.201923_g1767022_i0 PRJNA1120060 1785034 281 3.201923 8.99740363 Tritrichomonadida 740972 Parabasalia other_Eukaryota 43.5 0.0276   NR XP_067772654.1 135588 g1767022 i0 36.6 1.51601423487544 71 39 70.5 3 58 255 65 134 XP_067772654.1 DUF367-domain-containing protein [Histomonas meleagridis] diamond 426 43.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30984711 30984711 PRJNA1120060_P_NODE_1392274_length_298_cov_3.080000_g1374294_i0 PRJNA1120060 1392274 298 3.08 9.1784 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 45.8 0.00591   NR XP_068348138.1 1144522 g1374294 i0 41.8 0.553691275167785 55 32 55.4 0 129 293 921 975 XP_068348138.1 uncharacterized protein TRFO_10692 [Tritrichomonas foetus] diamond 165 45.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31079778 31079778 PRJNA1120060_P_NODE_178255_length_483_cov_3.758537_g162021_i0 PRJNA1120060 178255 483 3.758537 18.15373371 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 72 3.14e-11   NR XP_068350114.1 1144522 g162021 i0 48.7 0.987577639751553 76 39 47.2 0 374 147 1461 1536 XP_068350114.1 uncharacterized protein TRFO_36906 [Tritrichomonas foetus] diamond 477 72 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31238905 31238905 PRJNA1120060_P_NODE_875435_length_313_cov_1.266667_g857511_i0 PRJNA1120060 875435 313 1.266667 3.96466771 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 44.3 0.0227   NR XP_068355865.1 1144522 g857511 i0 35.3 0.488817891373802 51 32 47.9 1 200 51 269 319 XP_068355865.1 uncharacterized protein TRFO_30099 [Tritrichomonas foetus] diamond 153 44.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31585515 31585515 PRJNA1120060_P_NODE_1386616_length_298_cov_3.822222_g1368636_i0 PRJNA1120060 1386616 298 3.822222 11.39022156 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 43.5 0.0404   NR XP_001580261.1 412133 g1368636 i0 30.6 0.724832214765101 72 41 63.4 2 11 199 1418 1489 XP_001580261.1 ataxia telangiectasia mutated (ATM) -related family [Trichomonas vaginalis G3] diamond 216 43.5 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32177426 32177426 PRJNA1120060_P_NODE_2514378_length_253_cov_2.744444_g2496306_i0 PRJNA1120060 2514378 253 2.744444 6.94344332 root 1 Root_unresolved Root_unresolved 70.5 7e-12   NR AAC46935.1 5722 g2496306 i0 42.1 12.5928853754941 76 44 90.1 0 24 251 238 313 AAC46935.1 polyubiquitin, partial [Trichomonas vaginalis] diamond 3186 70.9 0.994358251057828 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32208929 32208929 PRJNA1120060_P_NODE_2469078_length_255_cov_1.516484_g2451008_i0 PRJNA1120060 2469078 255 1.516484 3.8670342 Trichomonas 5721 Parabasalia other_Eukaryota 65.1 5.75e-10   NR AAC46935.1 5722 g2451008 i0 41.9 10.5647058823529 74 43 87.1 0 254 33 696 769 AAC46935.1 polyubiquitin, partial [Trichomonas vaginalis] diamond 2694 65.5 0.993893129770992 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32724996 32724996 PRJNA1120060_P_NODE_431760_length_381_cov_2.805195_g414272_i0 PRJNA1120060 431760 381 2.805195 10.68779295 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 75.1 2.19e-14   NR XP_001301380.1 412133 g414272 i0 43.6 6.06299212598425 78 44 61.4 0 238 5 1 78 XP_001301380.1 structural constituent of ribosome [Trichomonas vaginalis G3] diamond 2310 75.1 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;